| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183621
Identifier: 189183621
GI number: 189183621
Start: 736516
End: 736875
Strand: Reverse
Name: 189183621
Synonym: OTT_0714
Alternate gene names: NA
Gene position: 736875-736516 (Counterclockwise)
Preceding gene: 189183622
Following gene: 189183620
Centisome position: 36.68
GC content: 28.61
Gene sequence:
>360_bases ATGAAAAAATGTATTATAACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGGGAGAGAAAGAGATT AATACCAAGTAGTAATCAAAGGAACAGAGATGGGAAGTTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATG TATCTCCATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGC TATAGTAGAATAATACAACTGTGTCATAGAATGTTGCTACCATTAGCAGTATTAATACATTATCTGAAAGGAGAAGAGAC TGGTATATATTACATACCTTTCATGTTTAAGAGGATTTAA
Upstream 100 bases:
>100_bases ATTATGATAAGTTGGAATATGAAATGTAGAGAATAAGAGGTATACAAAGAGAGAATGTTGAGTTATAAAAAAAATTTAAA TAAACAAGGAATAACCCAAC
Downstream 100 bases:
>100_bases CTAACAAGAAGAAATAAGTTAGATTAAGAGTTATTATGAGCTTTATACGCTTTATAAAATCTGCTATGTAGTTTATTTTC GTTTAAGTTGATATATGAAT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative; ISPg3 Transposase
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI
Sequences:
>Translated_119_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI >Mature_119_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS YSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14478; Mature: 14478
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH KNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI HHEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCC >Mature Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDC CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH KNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI HHEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA