| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183510
Identifier: 189183510
GI number: 189183510
Start: 623609
End: 623878
Strand: Reverse
Name: 189183510
Synonym: OTT_0603
Alternate gene names: NA
Gene position: 623878-623609 (Counterclockwise)
Preceding gene: 189183515
Following gene: 189183509
Centisome position: 31.05
GC content: 31.48
Gene sequence:
>270_bases ATGGTCTTAGAATACCTTAGAGAATACCGTACTTATTTCTATATAGGCCAGAACTATAGGATTAGTGAAAGTTCAGCATA TAAAGCTGTAAAATGTGTAGAAGATACCCTAGTTAAACACCCAAATTTTGCTCTTCTAGGTCGTAAAGCTCTAATGAAGA TTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGACTCCTATAGAAAGACATAAAAAAAACAAAAATTCTATT ATTCATGAAAGAAGAAAAGGCATACACTAA
Upstream 100 bases:
>100_bases AAGGTTTGCAAAGATAGTGGATATTTTGAGGAAAGCTGATGGTCTTAAGAAATCAAAAGGTGAACGTAAAAATAAGCTCA ATTTGTGGTAACAGTTGCTG
Downstream 100 bases:
>100_bases AAACTCAAATAGTGATAGACAAGAAAATGCACCAAGTAACAAGTAATATGTAAAGATTTTTCTAACGGTAAAAAACATGA CTTTAGATTATTTAAGAAAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MVLEYLREYRTYFYIGQNYRISESSAYKAVKCVEDTLVKHPNFALLGRKALMKIDMNYEVVLIDATETPIERHKKNKNSI IHERRKGIH
Sequences:
>Translated_89_residues MVLEYLREYRTYFYIGQNYRISESSAYKAVKCVEDTLVKHPNFALLGRKALMKIDMNYEVVLIDATETPIERHKKNKNSI IHERRKGIH >Mature_89_residues MVLEYLREYRTYFYIGQNYRISESSAYKAVKCVEDTLVKHPNFALLGRKALMKIDMNYEVVLIDATETPIERHKKNKNSI IHERRKGIH
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 10589; Mature: 10589
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLEYLREYRTYFYIGQNYRISESSAYKAVKCVEDTLVKHPNFALLGRKALMKIDMNYEV CHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEE VLIDATETPIERHKKNKNSIIHERRKGIH EEEECCCCCHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure MVLEYLREYRTYFYIGQNYRISESSAYKAVKCVEDTLVKHPNFALLGRKALMKIDMNYEV CHHHHHHHHHHEEEECCCEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEE VLIDATETPIERHKKNKNSIIHERRKGIH EEEECCCCCHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]