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The map label for this gene is atpC [H]

Identifier: 189183495

GI number: 189183495

Start: 600210

End: 600614

Strand: Reverse

Name: atpC [H]

Synonym: OTT_0588

Alternate gene names: 189183495

Gene position: 600614-600210 (Counterclockwise)

Preceding gene: 189183496

Following gene: 189183494

Centisome position: 29.9

GC content: 28.64

Gene sequence:

>405_bases
ATGAAACCTATAAATGGAACAACGCTTATAGTTAAAATTTTAGCTTTAGAAAAAATAATATACAATAATAATACTGTTGA
CATGTTAGTGCTTCCAGGTTTGGAGGGAGTGTTAGCAGTTTTACCTCAACATTTACCTATGCTAGTTGTATTAAAATTTG
GAACAGTAGAAGTTCATTATAATGATGGAAGTATTGATCGTTTTACTATTAGCGGCGGAATAGCAAAAGTTGATTCTCAA
GTAGTAGATATAATTTCAATGTTTGTAATGAATTGTATGCACATAGATATACTCAAAATAAAAGCTAGAATTGAGGAAAT
TAATGCCGTAACTTCGTCAAAGCAGAACACTTTATTACAAGAAGAGCATAAATTTTTAATTGCTAATTTAGAATTATTAA
GTTAA

Upstream 100 bases:

>100_bases
GATTCAAAGGGTTGATTGAGGGAAAATATGATGATTTGCCAGAAATGGCTTTTTACATGGTTGGTAGTATTGATGAAGCT
ATTGAAAAATCTAAAACATT

Downstream 100 bases:

>100_bases
ATAGTATTATTTATTACTAGAAGTTATAATAAAATAAATGACTATAATTGTAGGGATTGCTGTTTCTAAAGAGATATTTG
ATGCAGCTGTGTTAATTAAT

Product: ATP synthase epsilon chain

Products: NA

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKPINGTTLIVKILALEKIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGTVEVHYNDGSIDRFTISGGIAKVDSQ
VVDIISMFVMNCMHIDILKIKARIEEINAVTSSKQNTLLQEEHKFLIANLELLS

Sequences:

>Translated_134_residues
MKPINGTTLIVKILALEKIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGTVEVHYNDGSIDRFTISGGIAKVDSQ
VVDIISMFVMNCMHIDILKIKARIEEINAVTSSKQNTLLQEEHKFLIANLELLS
>Mature_134_residues
MKPINGTTLIVKILALEKIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGTVEVHYNDGSIDRFTISGGIAKVDSQ
VVDIISMFVMNCMHIDILKIKARIEEINAVTSSKQNTLLQEEHKFLIANLELLS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF02823 ATP-synt_DE_N [H]

EC number: NA

Molecular weight: Translated: 14868; Mature: 14868

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPINGTTLIVKILALEKIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGTVEVHY
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECEEEEEE
NDGSIDRFTISGGIAKVDSQVVDIISMFVMNCMHIDILKIKARIEEINAVTSSKQNTLLQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EEHKFLIANLELLS
HHCEEEEEEEEECC
>Mature Secondary Structure
MKPINGTTLIVKILALEKIIYNNNTVDMLVLPGLEGVLAVLPQHLPMLVVLKFGTVEVHY
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEECEEEEEE
NDGSIDRFTISGGIAKVDSQVVDIISMFVMNCMHIDILKIKARIEEINAVTSSKQNTLLQ
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EEHKFLIANLELLS
HHCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA