| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183494
Identifier: 189183494
GI number: 189183494
Start: 599966
End: 600172
Strand: Reverse
Name: 189183494
Synonym: OTT_0587
Alternate gene names: NA
Gene position: 600172-599966 (Counterclockwise)
Preceding gene: 189183495
Following gene: 189183493
Centisome position: 29.87
GC content: 29.95
Gene sequence:
>207_bases ATGACTATAATTGTAGGGATTGCTGTTTCTAAAGAGATATTTGATGCAGCTGTGTTAATTAATAATAAAGTTCAAATAAA AAAGTTAAATAATAATGTTGATGGATTTAACAAATTAGTAACACACTTAAAAAGCAGAGGAGATAATCACGGATTATGTT TGTATGGAAGCAGCCGGGATTTACTGAAAAGGCTTAGCACAATATGA
Upstream 100 bases:
>100_bases CAGAACACTTTATTACAAGAAGAGCATAAATTTTTAATTGCTAATTTAGAATTATTAAGTTAAATAGTATTATTTATTAC TAGAAGTTATAATAAAATAA
Downstream 100 bases:
>100_bases AAAAATGTATTATAACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGAGAGAGAAAGAGATTAATA CCAAGTAGTAATCAAAGGAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MTIIVGIAVSKEIFDAAVLINNKVQIKKLNNNVDGFNKLVTHLKSRGDNHGLCLYGSSRDLLKRLSTI
Sequences:
>Translated_68_residues MTIIVGIAVSKEIFDAAVLINNKVQIKKLNNNVDGFNKLVTHLKSRGDNHGLCLYGSSRDLLKRLSTI >Mature_67_residues TIIVGIAVSKEIFDAAVLINNKVQIKKLNNNVDGFNKLVTHLKSRGDNHGLCLYGSSRDLLKRLSTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7509; Mature: 7378
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIVGIAVSKEIFDAAVLINNKVQIKKLNNNVDGFNKLVTHLKSRGDNHGLCLYGSSRD CEEEEEEEECHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHH LLKRLSTI HHHHHHCC >Mature Secondary Structure TIIVGIAVSKEIFDAAVLINNKVQIKKLNNNVDGFNKLVTHLKSRGDNHGLCLYGSSRD EEEEEEEECHHHHHHHEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCHH LLKRLSTI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA