Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183493

Identifier: 189183493

GI number: 189183493

Start: 599097

End: 599852

Strand: Reverse

Name: 189183493

Synonym: OTT_0586

Alternate gene names: NA

Gene position: 599852-599097 (Counterclockwise)

Preceding gene: 189183494

Following gene: 189183490

Centisome position: 29.86

GC content: 29.1

Gene sequence:

>756_bases
TTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCAATGCAAGGATTGTAAAAATTATTATCTATA
TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC
TACCATTAGCAATATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTATATCGATTCTACAAAGTTAGCAATT
TGTCATAACAAACACATTTTCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAGAGTAGTTATGGCTTGTTCTT
AGGCTTTAAGCTTCATCTTATAATCAATAATAAAGGCAAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGACA
TATCTGTATCTTCGGTTTTTTCTAAAGGCTTATCTGGTAAATTGTTTAGTGATAAAGCTTACATATCTAAAGAGTTATTT
CATCAACTGCTGACCAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATACAAGA
TAATCAGTTATTAAATAAACGTTCCTTAATTGAATCTGTCTTTAATGTACTAAAAAAATATATGCATTTAGAGCATACTA
GACATCGCTCCCCTATTAATTTCCTTGTTCATATAATTGCTTCTTTTGCTAGTTATTCTATCTCCAAACTTAATCCCAGT
CTTATCTCTTCTTCTTCTCCTGACTCCTTATCCTAA

Upstream 100 bases:

>100_bases
AACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGAGAGAGAAAGAGATTAATACCAAGTAGTAATC
AAAGGAACAGAGATGGGAAG

Downstream 100 bases:

>100_bases
ATTGACGTTATTAACAAATTACAAAGTTGTTCAGTTAGTATAGTATGATCACTCACCTCTTTAGCAAAATTTTCGTTTTG
TTTTTGAGTAGGCAATGAAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGLFLGFKLHLIINNKGKIMSVKITKGNKSDISVSSVFSKGLSGKLFSDKAYISKELF
HQLLTNGLRLFTNLRKDMKTYLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPS
LISSSSPDSLS

Sequences:

>Translated_251_residues
MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGLFLGFKLHLIINNKGKIMSVKITKGNKSDISVSSVFSKGLSGKLFSDKAYISKELF
HQLLTNGLRLFTNLRKDMKTYLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPS
LISSSSPDSLS
>Mature_250_residues
SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLAILMHYLKGEETGIYYIDSTKLAIC
HNKHIFSNRVFNKISKIGKSSYGLFLGFKLHLIINNKGKIMSVKITKGNKSDISVSSVFSKGLSGKLFSDKAYISKELFH
QLLTNGLRLFTNLRKDMKTYLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPSL
ISSSSPDSLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28977; Mature: 28846

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLAILM
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGLFLGFKLHLIINNKGK
HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDISVSSVFSKGLSGKLFSDKAYISKELFHQLLTNGLRLFTNLRKDMKT
EEEEEEECCCCCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
LISSSSPDSLS
HHCCCCCCCCC
>Mature Secondary Structure 
SLAELLTIAIYFYVSQCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLWPRMLLPLAILM
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGLFLGFKLHLIINNKGK
HHHCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDISVSSVFSKGLSGKLFSDKAYISKELFHQLLTNGLRLFTNLRKDMKT
EEEEEEECCCCCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
LISSSSPDSLS
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA