| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is tme [C]
Identifier: 189183489
GI number: 189183489
Start: 595505
End: 596806
Strand: Reverse
Name: tme [C]
Synonym: OTT_0582
Alternate gene names: 189183489
Gene position: 596806-595505 (Counterclockwise)
Preceding gene: 189183490
Following gene: 189183488
Centisome position: 29.71
GC content: 34.18
Gene sequence:
>1302_bases ATGACTAATAACTTATCTAAAAATGATTCATTGATCTCGAAGTTAAGTCTTGAATATCATAAAAAAGATAACCTGCCAGG CAAAATAGCTATGATAACTACCAAGCCACTTGCAACTCAACATGACTTAGCGCTAGCTTATTCTCCTGGTGTATCTGCTC CATGTCTAAAGATCGTTGATAATATTAATGCAATTTATGACTATACCTCTCGAGGTAACACAGTTGCAGTAATTTCAAAT GGTACAGCAGTTCTAGGGCTAGGTAATTTAGGAGCTGCTGCTGCTAAACCTGTTATGGAAGGTAAAGCGGCATTATTTAA AAAATTTGCTGATATTGATGCTATAGATCTTGAGATAGATACTGAAGATCCTTATGAAATTATTAAGCTTATTCAATATC TTAAATACAATTGGGGGGGTATTAATTTAGAAGATATTAAGGCTCCTGAATGCTTTATTATAGAAAATAAGCTACAAGAA CTTGTAGATATTCCAGTATTTCATGATGACCAACATGGTACAGCTGTTGCAGTTACGGCAGGAGTTATTAATGCTGCTGA TCTTACAGGACGTCAGAATTTAAGAAATTTAAAAGTTATCATTAATGGAGCTGGAGCTGCTGGAATTGCTTGTGCAGAAT TATTAAAGTCTATAGGTATAGAAAATGTAATATTATGCGATAGCCAGGGCGTAATTTATAAAGGACGAACTAAAGGCATG AATGTATGGAAAGAAGCTCATGCTATCGATACTAAGTATAGAACTCTTAAAGAAGCAATAATTGGGGCTGATTTATTTTT AGGGTTATCAGTTAAAGGTGCTTTAACACAAGAAATGTTAGCTACTATGGCTGATAAGCCAATTATCTTTGCCTTAGCTA ATCCAGATCCAGAAATTATGCCTGATGAAGTTAAGTTTGTACGTCCGAATGCTATTGTTGCTACAGGAAGATCTGATTTT AGTAACCAAATAAATAATGTAATAGTGTTTCCTTATATTTTTAGAGGAGCATTAGATGTTATGGCAACAACAATAAATAA CTCAATGAAGATAGCTGCAGCTAAGGAAATAGCAGCACTTGCTACTCATCCAGTACCAGATTTAGTTACTAAAGCTCATT TAGGTCGAAAAATGGAATATGGATTTGATTACATTCTTCCTTCACCATTTGACCCAAGGCTACTTTATGCTATTCCACCA TTAGTAGCTAGTACAGCAATGAAAACTGGAGTAGCTAGAAAAAATATTGATCTTCAAAAATATAAAAACCATCTTTTTGA TAAAGCTGCATTTGCTGAGTAA
Upstream 100 bases:
>100_bases GACTCCATGGCAACAATCATTACTTTTACTACAATATTTTCCTTATTGTCTTTATCAATTATTATGTATATCTTTGCTTA AAATTAATAGGATAATCTTT
Downstream 100 bases:
>100_bases ATAGTTATATAAGTAGCTATAATAACGTAGATAATAGTAAAGAAGATGGCAATTTTTTTGTACACATCTAAACTTTACAA ATTCTTACGGCTATTTTATC
Product: malate oxidoreductase and phosphate acetyltransferase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTNNLSKNDSLISKLSLEYHKKDNLPGKIAMITTKPLATQHDLALAYSPGVSAPCLKIVDNINAIYDYTSRGNTVAVISN GTAVLGLGNLGAAAAKPVMEGKAALFKKFADIDAIDLEIDTEDPYEIIKLIQYLKYNWGGINLEDIKAPECFIIENKLQE LVDIPVFHDDQHGTAVAVTAGVINAADLTGRQNLRNLKVIINGAGAAGIACAELLKSIGIENVILCDSQGVIYKGRTKGM NVWKEAHAIDTKYRTLKEAIIGADLFLGLSVKGALTQEMLATMADKPIIFALANPDPEIMPDEVKFVRPNAIVATGRSDF SNQINNVIVFPYIFRGALDVMATTINNSMKIAAAKEIAALATHPVPDLVTKAHLGRKMEYGFDYILPSPFDPRLLYAIPP LVASTAMKTGVARKNIDLQKYKNHLFDKAAFAE
Sequences:
>Translated_433_residues MTNNLSKNDSLISKLSLEYHKKDNLPGKIAMITTKPLATQHDLALAYSPGVSAPCLKIVDNINAIYDYTSRGNTVAVISN GTAVLGLGNLGAAAAKPVMEGKAALFKKFADIDAIDLEIDTEDPYEIIKLIQYLKYNWGGINLEDIKAPECFIIENKLQE LVDIPVFHDDQHGTAVAVTAGVINAADLTGRQNLRNLKVIINGAGAAGIACAELLKSIGIENVILCDSQGVIYKGRTKGM NVWKEAHAIDTKYRTLKEAIIGADLFLGLSVKGALTQEMLATMADKPIIFALANPDPEIMPDEVKFVRPNAIVATGRSDF SNQINNVIVFPYIFRGALDVMATTINNSMKIAAAKEIAALATHPVPDLVTKAHLGRKMEYGFDYILPSPFDPRLLYAIPP LVASTAMKTGVARKNIDLQKYKNHLFDKAAFAE >Mature_432_residues TNNLSKNDSLISKLSLEYHKKDNLPGKIAMITTKPLATQHDLALAYSPGVSAPCLKIVDNINAIYDYTSRGNTVAVISNG TAVLGLGNLGAAAAKPVMEGKAALFKKFADIDAIDLEIDTEDPYEIIKLIQYLKYNWGGINLEDIKAPECFIIENKLQEL VDIPVFHDDQHGTAVAVTAGVINAADLTGRQNLRNLKVIINGAGAAGIACAELLKSIGIENVILCDSQGVIYKGRTKGMN VWKEAHAIDTKYRTLKEAIIGADLFLGLSVKGALTQEMLATMADKPIIFALANPDPEIMPDEVKFVRPNAIVATGRSDFS NQINNVIVFPYIFRGALDVMATTINNSMKIAAAKEIAALATHPVPDLVTKAHLGRKMEYGFDYILPSPFDPRLLYAIPPL VASTAMKTGVARKNIDLQKYKNHLFDKAAFAE
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=383, Percent_Identity=26.3707571801567, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI62420880, Length=383, Percent_Identity=26.3707571801567, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI239049447, Length=383, Percent_Identity=26.3707571801567, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4505143, Length=345, Percent_Identity=26.9565217391304, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1788806, Length=438, Percent_Identity=52.7397260273973, Blast_Score=450, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6322823, Length=233, Percent_Identity=32.1888412017167, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI78707242, Length=412, Percent_Identity=25.9708737864078, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI78707238, Length=412, Percent_Identity=25.9708737864078, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646388, Length=348, Percent_Identity=27.2988505747126, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI78707240, Length=350, Percent_Identity=26.8571428571429, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24646386, Length=348, Percent_Identity=27.2988505747126, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 46951; Mature: 46820
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNLSKNDSLISKLSLEYHKKDNLPGKIAMITTKPLATQHDLALAYSPGVSAPCLKIVD CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHH NINAIYDYTSRGNTVAVISNGTAVLGLGNLGAAAAKPVMEGKAALFKKFADIDAIDLEID CCHHEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC TEDPYEIIKLIQYLKYNWGGINLEDIKAPECFIIENKLQELVDIPVFHDDQHGTAVAVTA CCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEHHHHHHHHCCCCEECCCCCCEEEEEE GVINAADLTGRQNLRNLKVIINGAGAAGIACAELLKSIGIENVILCDSQGVIYKGRTKGM CCEECHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC NVWKEAHAIDTKYRTLKEAIIGADLFLGLSVKGALTQEMLATMADKPIIFALANPDPEIM HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCC PDEVKFVRPNAIVATGRSDFSNQINNVIVFPYIFRGALDVMATTINNSMKIAAAKEIAAL CCCCEEECCCEEEEECCHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH ATHPVPDLVTKAHLGRKMEYGFDYILPSPFDPRLLYAIPPLVASTAMKTGVARKNIDLQK HCCCCHHHHHHHHHCCCHHCCCCEECCCCCCCEEEEECCHHHHHHHHHHCCHHCCCCHHH YKNHLFDKAAFAE HHHHHHHHHHCCC >Mature Secondary Structure TNNLSKNDSLISKLSLEYHKKDNLPGKIAMITTKPLATQHDLALAYSPGVSAPCLKIVD CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHH NINAIYDYTSRGNTVAVISNGTAVLGLGNLGAAAAKPVMEGKAALFKKFADIDAIDLEID CCHHEEEECCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC TEDPYEIIKLIQYLKYNWGGINLEDIKAPECFIIENKLQELVDIPVFHDDQHGTAVAVTA CCCHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEHHHHHHHHCCCCEECCCCCCEEEEEE GVINAADLTGRQNLRNLKVIINGAGAAGIACAELLKSIGIENVILCDSQGVIYKGRTKGM CCEECHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC NVWKEAHAIDTKYRTLKEAIIGADLFLGLSVKGALTQEMLATMADKPIIFALANPDPEIM HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCC PDEVKFVRPNAIVATGRSDFSNQINNVIVFPYIFRGALDVMATTINNSMKIAAAKEIAAL CCCCEEECCCEEEEECCHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH ATHPVPDLVTKAHLGRKMEYGFDYILPSPFDPRLLYAIPPLVASTAMKTGVARKNIDLQK HCCCCHHHHHHHHHCCCHHCCCCEECCCCCCCEEEEECCHHHHHHHHHHCCHHCCCCHHH YKNHLFDKAAFAE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]