Click here to switch to the map view.

The map label for this gene is 189183488

Identifier: 189183488

GI number: 189183488

Start: 594667

End: 594843

Strand: Reverse

Name: 189183488

Synonym: OTT_0581

Alternate gene names: NA

Gene position: 594843-594667 (Counterclockwise)

Preceding gene: 189183489

Following gene: 189183482

Centisome position: 29.61

GC content: 33.9

Gene sequence:

>177_bases
ATGGATGAAGTTAACCTCAAAATTAAAGAACGTAAAATGCGTACTCGACGTCTTATTGAAATGGGTGGATTAGTTGCTAA
GGCTAAGCTTGATCACTTACCAACAAATACTTTATTTGGTGCGATTATTTCACTAAAAGAAACTCTAACACAACATCCAA
ATGTTCAAGATCATTGA

Upstream 100 bases:

>100_bases
TATATTCTTGCCTGATTTTTTTTATCTTTATGAATTACTAATATAGCAAATCTTATGCAGCAAAAAATTACTCTCCAACA
AAAAAAAGGCTAAGCTAATT

Downstream 100 bases:

>100_bases
ACTACAATTGGAAAGATATTTTTGATAAAGAACAGCAAAATAAAGCAGCTGTGATTTTAAAATTTTCCTCTGAACTATAG
TCATTTACAATGAAGTTTGC

Product: putative conjugative transfer protein TraD

Products: NA

Alternate protein names: Conjugative Transfer Protein; Conjugative Transfer Protein TraD

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLPTNTLFGAIISLKETLTQHPNVQDH

Sequences:

>Translated_58_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLPTNTLFGAIISLKETLTQHPNVQDH
>Mature_58_residues
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLPTNTLFGAIISLKETLTQHPNVQDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6651; Mature: 6651

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLPTNTLFGAIISLKETLTQHPNVQDH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLPTNTLFGAIISLKETLTQHPNVQDH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA