| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183467
Identifier: 189183467
GI number: 189183467
Start: 574834
End: 575085
Strand: Reverse
Name: 189183467
Synonym: OTT_0560
Alternate gene names: NA
Gene position: 575085-574834 (Counterclockwise)
Preceding gene: 189183470
Following gene: 189183466
Centisome position: 28.63
GC content: 29.76
Gene sequence:
>252_bases ATGTCTCTTGGAAACGAAGGTCAACAGAAAAATAAAAGTATATTTAATAAAAATATACAGTCAAAACTGTTACTAAGACA TCTAGCAGCTGGTGATAAAGAGCTTTTAAAACTTACACATCAACTTAAAACACTAAACTTAAACATAATAGATGTATTCA AACAGCTCAAAAGTGAGTCAGAAAGAGTTAGAAAACATCAGCCCGAAATAGAAAACAAAAAATCAACATTAAGATATGGA AGCCATATGTGA
Upstream 100 bases:
>100_bases CAGCAAACTGATCTATATTAATAACATCTTCATTCACATTCTGCTTTAATAAATTTAATATCAGAAAGTATTTTTTATAC AAAAATAGTAGGGGAATTCT
Downstream 100 bases:
>100_bases TATACCAGTCAGCTTAGCTAATTGTTAGCTAAGCTTGCTATTTTAAATTTCTAAAAAACAAAGTTAATAAACTTAACCGT AGGAGAATAATATGGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSLGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESERVRKHQPEIENKKSTLRYG SHM
Sequences:
>Translated_83_residues MSLGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESERVRKHQPEIENKKSTLRYG SHM >Mature_82_residues SLGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSESERVRKHQPEIENKKSTLRYGS HM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9637; Mature: 9506
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSES CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH ERVRKHQPEIENKKSTLRYGSHM HHHHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SLGNEGQQKNKSIFNKNIQSKLLLRHLAAGDKELLKLTHQLKTLNLNIIDVFKQLKSES CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH ERVRKHQPEIENKKSTLRYGSHM HHHHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA