Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183456

Identifier: 189183456

GI number: 189183456

Start: 567376

End: 568158

Strand: Reverse

Name: 189183456

Synonym: OTT_0549

Alternate gene names: NA

Gene position: 568158-567376 (Counterclockwise)

Preceding gene: 189183457

Following gene: 189183455

Centisome position: 28.28

GC content: 32.82

Gene sequence:

>783_bases
ATGACAAGGCATATAAAGAGCTTAAAGTTATATTGCAATAATGAAGCAACTAAAAGCATTAACAGCTTAATAAATCAGCT
CAGCAGACCAAATGAGAAATCAGCTAGCATAACTCTGAAAACTGCTCATGATTTTGAGAAAGAACGGACAAAGCCAACTG
TTTTTAGTACACTTGAAAACTGGTTTAAGTCTATAATCAATGATATCAATGATAGATCTCATGTGAATGAAGAATATTAT
TACTTTACCGCTAAACCAGAGCAAGAAGCTAAAGTAGAAAAAGTCCAGCAAGAGAATAGCATAAAGCAATGCACCACCAA
AGATATTTCTACTCCATTGTTTATGCAAATCAAAGAACAAAGACAATATGATTATGATGTAACCATTCTGTCAGCAGAAG
GAAAAACGATATCAAGTTTTCAGGAAGCTGGCATTGATAGCAGAATGGTATATAGCTCAAATGTAAATAATTTAAAGTAT
TATCAGCCATTTCAAGGAGAAAAGATTCTTATAGCTGCAAATAATGATAAACAAAATAAAGAATATGTAAGCACTATAAA
CGAGGCTGTAAAAGTACTGACAAGCAAAGGAGCAATTACTAGCATCGTAATTCATTCAGAAGGTGAAGATTTTAACGAAA
TGCTAAAAAATAAAGGAGCAACAGCTGTTAAGGAGCTTATGATACCTGAAATCATGAAGTTAATTAATACTCAGAACGTA
AAAACAGAGTCTGAACAAGTCGTAAAAACTGACATAGCTCCAAAAATTGGACTTAGGAGATAG

Upstream 100 bases:

>100_bases
TGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGCTTCTATAAAAGATGTATACGTTTTGCATAACGGAGTAAGTAATA
TAAGCAGCTCATACGTAGCT

Downstream 100 bases:

>100_bases
TTCTTACGATCGAAAATTGAATGTAAGCTATTCATTCACAGAGCGAATTACAAAATGAGCTATACATGATAGTTGAGATG
GACTTTTGTAATTCGCATTA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: MobA/MobL Family Protein; Conjugal Transfer Protein TraA; Conjugative Transfer Protein TraI; Conjugative Transfer Protein

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSTLENWFKSIINDINDRSHVNEEYY
YFTAKPEQEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKY
YQPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNV
KTESEQVVKTDIAPKIGLRR

Sequences:

>Translated_260_residues
MTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSTLENWFKSIINDINDRSHVNEEYY
YFTAKPEQEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKY
YQPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNV
KTESEQVVKTDIAPKIGLRR
>Mature_259_residues
TRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSTLENWFKSIINDINDRSHVNEEYYY
FTAKPEQEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQRQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKYY
QPFQGEKILIAANNDKQNKEYVSTINEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNVK
TESEQVVKTDIAPKIGLRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29746; Mature: 29615

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSTLEN
CCCCCCHHEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHH
WFKSIINDINDRSHVNEEYYYFTAKPEQEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQ
HHHHHHHHCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANNDKQNK
CCCCCCEEEEECCCCCHHHHHHCCCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCCHH
EYVSTINEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNV
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
KTESEQVVKTDIAPKIGLRR
CCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRHIKSLKLYCNNEATKSINSLINQLSRPNEKSASITLKTAHDFEKERTKPTVFSTLEN
CCCCCHHEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCCHHHHHHHH
WFKSIINDINDRSHVNEEYYYFTAKPEQEAKVEKVQQENSIKQCTTKDISTPLFMQIKEQ
HHHHHHHHCCCHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RQYDYDVTILSAEGKTISSFQEAGIDSRMVYSSNVNNLKYYQPFQGEKILIAANNDKQNK
CCCCCCEEEEECCCCCHHHHHHCCCCCEEEECCCCCCCEEECCCCCCEEEEEECCCCCHH
EYVSTINEAVKVLTSKGAITSIVIHSEGEDFNEMLKNKGATAVKELMIPEIMKLINTQNV
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
KTESEQVVKTDIAPKIGLRR
CCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA