Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183433

Identifier: 189183433

GI number: 189183433

Start: 548653

End: 549834

Strand: Reverse

Name: 189183433

Synonym: OTT_0526

Alternate gene names: NA

Gene position: 549834-548653 (Counterclockwise)

Preceding gene: 189183434

Following gene: 189183432

Centisome position: 27.37

GC content: 38.32

Gene sequence:

>1182_bases
ATGCTCAGATACGCCCATAAAATGCCGCCTGAATTCCAGAACTCATTTATAGATGCCTTGCAAAGAAATGGTATCAAATT
GCCTCCCGATTGGCACAGTACCATACATTTGTTGAATTTATCATCGTTGCTTGACCTTCTTAAGCGATCAGACCCTAAAG
ACCATCCGCATCGATGCGCTGATATTCGCGAACTTATAAATCATATCTTATCAGAGTTAAATAACATGCAAAAAATAGAT
CGTGTTGAAATTAAACCTTATGACCCAAATTGGCCTCATATTTTTGAAAAAGAGGCACCACTTATCCGTCAAGCATTGAG
GGATAACTGCATTGCTATTTATCATGTCGGCTCGACGTCTGTTCCAGGCTTGGCCGCTAAGCCTAAGATAGATATTATCG
CAGTTGTACGAAATTTGTTTTTTGATAAATTACAATTGGAGGCTGTGGGGTATAAATATAGGGGTGGGTTTAATATCCCT
CTGCGCAGAAGCTTCACAATAAGAACGGCTGATAAAAACATCAATCTTCACGTTTTTGAAGAAAACGATCCTGAAATTGA
ATTAAATATTTTATTTAGGGATCATTTGCGGGAGAACCCTAGTGCTCGGGATGAATATGCATTGCTTAAATACAAGCTGA
TTGCAGAAGAATCTTCCCACCAGAAAAACAACTCTATTTACAAAGGATATACTTTGGGTAAGCATGACTTTATCCAAAAT
ATCTTAAAAAAGTCTGGCTTCAATAAATACCGATTTGTGCTATGCACTCACACTTTAGAATGGGCTACAGCCAAACATTT
CCGCGACACTTATTTCTTTGGTCCACACGGCATAGAAGATCCTTATACATGGACATTTAACCATGAAGAGCATGCTCATC
TTGTTTTATATCAAGGCACAGAGATTGTTGCTTACGCCCATATTCAGTTTTGGCCAAATCAAAGAGCGGCAATTCTTATT
ATTGCCACTGATGAGAATAAGCGAAATCAAAATTCTGGCAGTCAATTTTTGGCTTTAATCGAGAAGTGGTTGAAAAGTTT
AGGAGTTAAAAGCCTTCATGCTGAATCTAGACAAAGCAGTTTAAGATTCTATCTCAAAAACGGCTATACAGAAGTGCCGT
TTAATGATCCCGAAAACCATGAATCCGATCCAAATGATGTTCCAGTGGGCAAGGTTTTATGA

Upstream 100 bases:

>100_bases
TAATATTTTGGTAGATAAAATTAACGGCTCTTGGGTTGTGACCTGCATTTTGGACTGGGAATTTGCTTTTTCTAGGTCTT
GCCTTTGGAATGTGGCTAAC

Downstream 100 bases:

>100_bases
TAAAGATTGAAACAATTACATTAGACCTAGCTGAAGTACTCTGCCGCAAAATTACAGTTGATTTACCGGAGTACTTTGGT
TTTGCCCCAAGTGAACGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLRYAHKMPPEFQNSFIDALQRNGIKLPPDWHSTIHLLNLSSLLDLLKRSDPKDHPHRCADIRELINHILSELNNMQKID
RVEIKPYDPNWPHIFEKEAPLIRQALRDNCIAIYHVGSTSVPGLAAKPKIDIIAVVRNLFFDKLQLEAVGYKYRGGFNIP
LRRSFTIRTADKNINLHVFEENDPEIELNILFRDHLRENPSARDEYALLKYKLIAEESSHQKNNSIYKGYTLGKHDFIQN
ILKKSGFNKYRFVLCTHTLEWATAKHFRDTYFFGPHGIEDPYTWTFNHEEHAHLVLYQGTEIVAYAHIQFWPNQRAAILI
IATDENKRNQNSGSQFLALIEKWLKSLGVKSLHAESRQSSLRFYLKNGYTEVPFNDPENHESDPNDVPVGKVL

Sequences:

>Translated_393_residues
MLRYAHKMPPEFQNSFIDALQRNGIKLPPDWHSTIHLLNLSSLLDLLKRSDPKDHPHRCADIRELINHILSELNNMQKID
RVEIKPYDPNWPHIFEKEAPLIRQALRDNCIAIYHVGSTSVPGLAAKPKIDIIAVVRNLFFDKLQLEAVGYKYRGGFNIP
LRRSFTIRTADKNINLHVFEENDPEIELNILFRDHLRENPSARDEYALLKYKLIAEESSHQKNNSIYKGYTLGKHDFIQN
ILKKSGFNKYRFVLCTHTLEWATAKHFRDTYFFGPHGIEDPYTWTFNHEEHAHLVLYQGTEIVAYAHIQFWPNQRAAILI
IATDENKRNQNSGSQFLALIEKWLKSLGVKSLHAESRQSSLRFYLKNGYTEVPFNDPENHESDPNDVPVGKVL
>Mature_393_residues
MLRYAHKMPPEFQNSFIDALQRNGIKLPPDWHSTIHLLNLSSLLDLLKRSDPKDHPHRCADIRELINHILSELNNMQKID
RVEIKPYDPNWPHIFEKEAPLIRQALRDNCIAIYHVGSTSVPGLAAKPKIDIIAVVRNLFFDKLQLEAVGYKYRGGFNIP
LRRSFTIRTADKNINLHVFEENDPEIELNILFRDHLRENPSARDEYALLKYKLIAEESSHQKNNSIYKGYTLGKHDFIQN
ILKKSGFNKYRFVLCTHTLEWATAKHFRDTYFFGPHGIEDPYTWTFNHEEHAHLVLYQGTEIVAYAHIQFWPNQRAAILI
IATDENKRNQNSGSQFLALIEKWLKSLGVKSLHAESRQSSLRFYLKNGYTEVPFNDPENHESDPNDVPVGKVL

Specific function: Unknown

COG id: COG2320

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0157 (GrpB) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007344 [H]

Pfam domain/function: PF04229 UPF0157 [H]

EC number: NA

Molecular weight: Translated: 45754; Mature: 45754

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYAHKMPPEFQNSFIDALQRNGIKLPPDWHSTIHLLNLSSLLDLLKRSDPKDHPHRCA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHHHHHHHHCCCCCCCCHHHH
DIRELINHILSELNNMQKIDRVEIKPYDPNWPHIFEKEAPLIRQALRDNCIAIYHVGSTS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
VPGLAAKPKIDIIAVVRNLFFDKLQLEAVGYKYRGGFNIPLRRSFTIRTADKNINLHVFE
CCCCCCCCCHHHHHHHHHHHHHHHEEEEECEEECCCCCCCCCCEEEEEECCCCCEEEEEE
ENDPEIELNILFRDHLRENPSARDEYALLKYKLIAEESSHQKNNSIYKGYTLGKHDFIQN
CCCCCEEEEEEEEHHHCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECEECCHHHHHHH
ILKKSGFNKYRFVLCTHTLEWATAKHFRDTYFFGPHGIEDPYTWTFNHEEHAHLVLYQGT
HHHHCCCCCEEEEEEECCHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEEEECC
EIVAYAHIQFWPNQRAAILIIATDENKRNQNSGSQFLALIEKWLKSLGVKSLHAESRQSS
EEEEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRFYLKNGYTEVPFNDPENHESDPNDVPVGKVL
HEEEEECCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRYAHKMPPEFQNSFIDALQRNGIKLPPDWHSTIHLLNLSSLLDLLKRSDPKDHPHRCA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEHHHHHHHHHCCCCCCCCHHHH
DIRELINHILSELNNMQKIDRVEIKPYDPNWPHIFEKEAPLIRQALRDNCIAIYHVGSTS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
VPGLAAKPKIDIIAVVRNLFFDKLQLEAVGYKYRGGFNIPLRRSFTIRTADKNINLHVFE
CCCCCCCCCHHHHHHHHHHHHHHHEEEEECEEECCCCCCCCCCEEEEEECCCCCEEEEEE
ENDPEIELNILFRDHLRENPSARDEYALLKYKLIAEESSHQKNNSIYKGYTLGKHDFIQN
CCCCCEEEEEEEEHHHCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECEECCHHHHHHH
ILKKSGFNKYRFVLCTHTLEWATAKHFRDTYFFGPHGIEDPYTWTFNHEEHAHLVLYQGT
HHHHCCCCCEEEEEEECCHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCEEEEEEECC
EIVAYAHIQFWPNQRAAILIIATDENKRNQNSGSQFLALIEKWLKSLGVKSLHAESRQSS
EEEEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LRFYLKNGYTEVPFNDPENHESDPNDVPVGKVL
HEEEEECCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]