| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183429
Identifier: 189183429
GI number: 189183429
Start: 546374
End: 546880
Strand: Reverse
Name: 189183429
Synonym: OTT_0522
Alternate gene names: NA
Gene position: 546880-546374 (Counterclockwise)
Preceding gene: 189183430
Following gene: 189183428
Centisome position: 27.22
GC content: 37.48
Gene sequence:
>507_bases GTGATTTTAGCGCTAGAAAAATTAGTGTATGTGGTCATTCTCAAGTCTGCAACAGATGTTATTGCCGAGAGCCAAGCAAA GGGAGACATGCGTCCATGGGAGCAGCCTGACTTTGTAGATAAAATCGTTTTAACACAGAAATTACGGCAAATGAATGCAG TGTGTGAAGTTCAATTTTATGACAGATCGCCATTTTGCGCTTATGCATTGTGGCATTATTCATCTGATTGGCATAATAGT AATTTTATACCGTCGCCTGTTTTGTTAGATGAAATTGATAGGTGTTTAAAGGCTGGGATTTATCAAAACAGAGTATTCTT TTTTGAAAACCTTAGCTTTATTGAGCATACCGATGCCAGAAAAATTTCTTATGAAGATGCTTTGATTTTTGAGCAGATGC ACCTGGATGTTTACAAAGAATTTGGCTTTGAAATTGTACTGGTGCCCAAGCAATCGATTGAAGAACGTTGCAGATTTGTT CTTACAACAGCGGGCATTCAAAATTAA
Upstream 100 bases:
>100_bases CGTTGGATTTATTGAAAGGGATGTGTTGGCTTATGAATAATTTAAATCAAGAAAAAAACGCTTCATCTTCACCAGCACTC TAGGCAGCGGAAAAACCTCT
Downstream 100 bases:
>100_bases ATGCTAAATGATTTAATATCTCGCATAATCATAATTGTACATTATCTCTTGCAGGCCTTTTGTATTATACTTTTCATACT TTCTCTTATCCTAACCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MILALEKLVYVVILKSATDVIAESQAKGDMRPWEQPDFVDKIVLTQKLRQMNAVCEVQFYDRSPFCAYALWHYSSDWHNS NFIPSPVLLDEIDRCLKAGIYQNRVFFFENLSFIEHTDARKISYEDALIFEQMHLDVYKEFGFEIVLVPKQSIEERCRFV LTTAGIQN
Sequences:
>Translated_168_residues MILALEKLVYVVILKSATDVIAESQAKGDMRPWEQPDFVDKIVLTQKLRQMNAVCEVQFYDRSPFCAYALWHYSSDWHNS NFIPSPVLLDEIDRCLKAGIYQNRVFFFENLSFIEHTDARKISYEDALIFEQMHLDVYKEFGFEIVLVPKQSIEERCRFV LTTAGIQN >Mature_168_residues MILALEKLVYVVILKSATDVIAESQAKGDMRPWEQPDFVDKIVLTQKLRQMNAVCEVQFYDRSPFCAYALWHYSSDWHNS NFIPSPVLLDEIDRCLKAGIYQNRVFFFENLSFIEHTDARKISYEDALIFEQMHLDVYKEFGFEIVLVPKQSIEERCRFV LTTAGIQN
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19682; Mature: 19682
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILALEKLVYVVILKSATDVIAESQAKGDMRPWEQPDFVDKIVLTQKLRQMNAVCEVQFY CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE DRSPFCAYALWHYSSDWHNSNFIPSPVLLDEIDRCLKAGIYQNRVFFFENLSFIEHTDAR CCCCCEEHHEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCC KISYEDALIFEQMHLDVYKEFGFEIVLVPKQSIEERCRFVLTTAGIQN EECHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEHCCCCCCC >Mature Secondary Structure MILALEKLVYVVILKSATDVIAESQAKGDMRPWEQPDFVDKIVLTQKLRQMNAVCEVQFY CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEE DRSPFCAYALWHYSSDWHNSNFIPSPVLLDEIDRCLKAGIYQNRVFFFENLSFIEHTDAR CCCCCEEHHEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCC KISYEDALIFEQMHLDVYKEFGFEIVLVPKQSIEERCRFVLTTAGIQN EECHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHEEHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA