Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183330

Identifier: 189183330

GI number: 189183330

Start: 440441

End: 440800

Strand: Reverse

Name: 189183330

Synonym: OTT_0423

Alternate gene names: NA

Gene position: 440800-440441 (Counterclockwise)

Preceding gene: 189183331

Following gene: 189183329

Centisome position: 21.94

GC content: 29.17

Gene sequence:

>360_bases
ATGAAAAAATGTATTATAACAGTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGGGAGAGAAATAGATT
AATACCAAGTAGTAATCAAAGGAACAGAGATGGGAAGTTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATG
TATCTCCATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTTATAAGTATAAAGGATACTTTTGCCTACCAAGC
TATAGTAGAATAATACAACTGTTGCCTAGAATGTTGCTACCATTAGTCGTATTAACGCATTATCTGAAAGGAGAGGAGAT
TGGTATATATTACATACCTTTCATGTTTAAGATGATTTAA

Upstream 100 bases:

>100_bases
ATTTAGGATAAGTGACACTATGGAAGGTAGTGAAAAAAGGTATACAAAGAAAGAATGTTGAGCTACAAAGAAAATTTAAA
TAAACAAGGAATAACCCAAC

Downstream 100 bases:

>100_bases
CTAACAAGAAGAAATAAGTTAGATTAAGAGTTATTATGAGCTTTATACGCTTTATAAAATCTGCCATGTAGTTTATTCTC
GTTTGAATTGATACATGAAT

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKKCIITVYYLIDNFCKIYQEWERNRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS
YSRIIQLLPRMLLPLVVLTHYLKGEEIGIYYIPFMFKMI

Sequences:

>Translated_119_residues
MKKCIITVYYLIDNFCKIYQEWERNRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS
YSRIIQLLPRMLLPLVVLTHYLKGEEIGIYYIPFMFKMI
>Mature_119_residues
MKKCIITVYYLIDNFCKIYQEWERNRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPS
YSRIIQLLPRMLLPLVVLTHYLKGEEIGIYYIPFMFKMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14437; Mature: 14437

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCIITVYYLIDNFCKIYQEWERNRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
KNYYLYYLSYKYKGYFCLPSYSRIIQLLPRMLLPLVVLTHYLKGEEIGIYYIPFMFKMI
HHEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCC
>Mature Secondary Structure
MKKCIITVYYLIDNFCKIYQEWERNRLIPSSNQRNRDGKLSLAELLTIAIYFYVSPCKDC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
KNYYLYYLSYKYKGYFCLPSYSRIIQLLPRMLLPLVVLTHYLKGEEIGIYYIPFMFKMI
HHEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA