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The map label for this gene is traC [C]

Identifier: 189183320

GI number: 189183320

Start: 433728

End: 434882

Strand: Reverse

Name: traC [C]

Synonym: OTT_0413

Alternate gene names: 189183320

Gene position: 434882-433728 (Counterclockwise)

Preceding gene: 189183321

Following gene: 189183318

Centisome position: 21.65

GC content: 38.27

Gene sequence:

>1155_bases
TTGCTTGCATGGACATTGGTTGGAGCTAGTGTTTCGGCTCAAAATGAAATTGCTGAATTTCTGAAAAGCGATGAAAATTT
ACCTGCTGAAAGTAGCCTACAAGTCTTAATGATTGGTAGTAATAATATAGAGCATTTTTTAAGCAACTGGCAGTCATATC
GTAAAGGAGAGATATTTATTGAGTTAGCTAATAAAAGAACAGAGTTTTTGCATGACCAAGCTCAAAAATCAGGTTCTGTA
AAGGATGTAGTATTGTTGATTTCAGTAACTATACCTAATTTAAATGCAAATATAGATGATATGATTCGCAGAAGAGATGC
TTTAAAAGATACGTTTAGGTCCATGAAAGCTAAGCAATCTGCATCAGCGTTTTGCTCGATGTTAAGGCGCAGTGGATGGT
ATTTTGTGCCATGTAAATATGATCATGTGGCCGTGTTACTAGCTGCACTACCAATGCAATTAGTTGAACAAGGCCCAAAA
GGTATATTGGGTCAAAAAACATCAGGAGTTGGAGTAGCACTTTCTAGCTTAGGTAGAGGCATAAAAACTGTTTCTGTAGA
GAGTAAAGTATTATTGCCAATCATTGGTGAATGGAAAGGTGATTTAAGCTCTCCAGGTATGTTGCTAGCTGGAAGACGAG
GTCAAATAATGTACTGGTCGCCTTTTGGTGGAGCTTTATTACCTGCATTAAATAAGCATGGGGTAGCTCCAAATGAGAAC
TTTAACCTTTGTATAGCTGGAGTTCCAGGGTCTGGAAAATCTGTTTTTATGCAAGAATTAATGCTATCAGTTCTAGGAGT
TGGTGGGAAAGTTTTTGCTCTTGATTACGGAAGATCATTTAAGCGTACATGCTTGATTCTAGGAAGCAGCTACATAGAAT
TTGACATGAAAAATCCTGTATCAATTAATCCATTTTCCGAAGTGCCAGAAGATGATAGTGCAAAGTCTATAGAGGCTAGA
TCCGACTTTTTATCTAACTTTCCATCCATTTTAGCTACTATGGCTGCACCTCAGTATGGAACAAGCGATCTACAGCAACC
AATGCTACAGAGTGCTTTAACACTTGCGCTACTCTCCCTCATATATAGCATATGCTCCTTCAAGTTCAGCTTCAGCCTCA
GCTTCTGCTGTGTCATTATGCTGAAGTTTTGTTAA

Upstream 100 bases:

>100_bases
TAAGGATTTTGATTGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGACTCAGCTATTCTTTAATC
GTGGTTCAATAGGTTTTGTA

Downstream 100 bases:

>100_bases
ATCAGTATTACTTAAATTCTCCAATATCATCATCCTTACTTCTGGTGGCAAGTGAAGCCAAGATATCTGACTTTCTTGAT
TAGCATCCTGATTGGATTCA

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: Type-IV Secretion System Protein TraC; Inner-Membrane Protein TraC; Pilus Biogenesis Protein; Conjugative Transfer Protein; Sex Pilus Assembly And Synthesis Protein; Conjugal Transfer Protein TraC; TraC Protein; Sex Pilus Assembly And Synthesis Protein TraC; Sex Pilus Assembly Protein; Conjugative Transfer Protein TraB; ATPase; F-Pilin Subunit Assembly Into Extended F Pili; Type IV Secretory Pathway Protein; TraC Conjugative Transfer Protein; Type IV Secretory Pathway VirB4 Component

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MLAWTLVGASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIEHFLSNWQSYRKGEIFIELANKRTEFLHDQAQKSGSV
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPK
GILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNEN
FNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEAR
SDFLSNFPSILATMAAPQYGTSDLQQPMLQSALTLALLSLIYSICSFKFSFSLSFCCVIMLKFC

Sequences:

>Translated_384_residues
MLAWTLVGASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIEHFLSNWQSYRKGEIFIELANKRTEFLHDQAQKSGSV
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPK
GILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNEN
FNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEAR
SDFLSNFPSILATMAAPQYGTSDLQQPMLQSALTLALLSLIYSICSFKFSFSLSFCCVIMLKFC
>Mature_384_residues
MLAWTLVGASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIEHFLSNWQSYRKGEIFIELANKRTEFLHDQAQKSGSV
KDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPK
GILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNEN
FNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEAR
SDFLSNFPSILATMAAPQYGTSDLQQPMLQSALTLALLSLIYSICSFKFSFSLSFCCVIMLKFC

Specific function: Required For The Assembly Of Mature F-Pilin Subunits Into Extended F Pili. [C]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41927; Mature: 41927

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAWTLVGASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIEHFLSNWQSYRKGEIFI
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
ELANKRTEFLHDQAQKSGSVKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKAKQS
EEHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRG
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
IKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNEN
CEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCC
FNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFALDYGRSFKRTCLILGSSYIEFDMKNPV
CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHEEEEECCCEEEEECCCCC
SINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPMLQSALTLALLSL
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IYSICSFKFSFSLSFCCVIMLKFC
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAWTLVGASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIEHFLSNWQSYRKGEIFI
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEE
ELANKRTEFLHDQAQKSGSVKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKAKQS
EEHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRG
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
IKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNEN
CEEEEECCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHCCCCCCCC
FNLCIAGVPGSGKSVFMQELMLSVLGVGGKVFALDYGRSFKRTCLILGSSYIEFDMKNPV
CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHEEEEECCCEEEEECCCCC
SINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPMLQSALTLALLSL
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IYSICSFKFSFSLSFCCVIMLKFC
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA