Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183291

Identifier: 189183291

GI number: 189183291

Start: 399228

End: 399617

Strand: Reverse

Name: 189183291

Synonym: OTT_0384

Alternate gene names: NA

Gene position: 399617-399228 (Counterclockwise)

Preceding gene: 189183292

Following gene: 189183290

Centisome position: 19.89

GC content: 26.92

Gene sequence:

>390_bases
GTGATATATTTTTATTTATCTTCATGCAAGGATTTTAAAAATTATTATCTATATTACGCACGTTATAAGTATAAAGGATA
CTTTTGTTTACCAAGTTATAGTAGAATAATACAACTATGGCCTAGAATGTTGCTACCACTCACTAGCTGTATAATGCATT
GTCTAGGAGATGAGACAGGTATATTATATGGTACTATTGCAGCAATCAGAGTAATTATCGATTCTATAAAGTTAGCAATT
TATCATAACAAATATATTTCCAGCAATAGAGTTTGTAATAGAATTTCTAAAATTTGCAAGAGTAGTTATTGCTTGTTCTT
ATGCTTTAAGCTACATCTTGTAATTAATAATAAAGTTCAAACAAAAAAATTTAATAATGATGCTGAATGA

Upstream 100 bases:

>100_bases
TTGCAAGATATATCAAGAGTGCAAAAGAAAGAGATTAATACCAAGTAATAATCAAAGAAACAGAGATGGATAGTTATCCT
TAGCTGAGTTATTAACAATA

Downstream 100 bases:

>100_bases
TTGAACAAATTAGTAACATACTTAAAAAGCAGAAAGGCTAATGGTCATGTTTATGAAGAAGAAAAGTTAGTTGTTAGTAA
CTTCTATATTTTATAGAACT

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative; Transposase IS4 Family Protein

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIYFYLSSCKDFKNYYLYYARYKYKGYFCLPSYSRIIQLWPRMLLPLTSCIMHCLGDETGILYGTIAAIRVIIDSIKLAI
YHNKYISSNRVCNRISKICKSSYCLFLCFKLHLVINNKVQTKKFNNDAE

Sequences:

>Translated_129_residues
MIYFYLSSCKDFKNYYLYYARYKYKGYFCLPSYSRIIQLWPRMLLPLTSCIMHCLGDETGILYGTIAAIRVIIDSIKLAI
YHNKYISSNRVCNRISKICKSSYCLFLCFKLHLVINNKVQTKKFNNDAE
>Mature_129_residues
MIYFYLSSCKDFKNYYLYYARYKYKGYFCLPSYSRIIQLWPRMLLPLTSCIMHCLGDETGILYGTIAAIRVIIDSIKLAI
YHNKYISSNRVCNRISKICKSSYCLFLCFKLHLVINNKVQTKKFNNDAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYFYLSSCKDFKNYYLYYARYKYKGYFCLPSYSRIIQLWPRMLLPLTSCIMHCLGDETG
CEEEEECCHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ILYGTIAAIRVIIDSIKLAIYHNKYISSNRVCNRISKICKSSYCLFLCFKLHLVINNKVQ
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
TKKFNNDAE
ECCCCCCCC
>Mature Secondary Structure
MIYFYLSSCKDFKNYYLYYARYKYKGYFCLPSYSRIIQLWPRMLLPLTSCIMHCLGDETG
CEEEEECCHHHHHHHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ILYGTIAAIRVIIDSIKLAIYHNKYISSNRVCNRISKICKSSYCLFLCFKLHLVINNKVQ
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEE
TKKFNNDAE
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA