| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183290
Identifier: 189183290
GI number: 189183290
Start: 398596
End: 399036
Strand: Reverse
Name: 189183290
Synonym: OTT_0383
Alternate gene names: NA
Gene position: 399036-398596 (Counterclockwise)
Preceding gene: 189183291
Following gene: 189183282
Centisome position: 19.86
GC content: 33.79
Gene sequence:
>441_bases ATGAAATTTGATCAAATTAAACAGTTAAAGGATGAAAAATTTCGTCGATTAACAGGAGTAAGGAAGGGAACATTTTCAAA GATGGTGGATATTTTGAGGAAAGCTGATGATCTTAAGAAATCAAAAGGTGTGCGTAAAAATAAGCTTGATTTGGAGGAAC AGTTGCTGATGGGCTTAGAATACCTTAGAGAATACCGCACTTATTTCCATATAGGCCAGAACTATGGGATTAGTGAAAGT TCAGCATATAAAGATGTAAAATGGGTAGAAGAAGACACCATAGTTAAACACCCAAACTTTGCTCTTCCAGGTCGTAAAGC TCTAATGAAGAGTGATATGAATTATGAAGTAGTCTTGATTGATGCTACTGAGAGTCCTATAGAAAGACATAAAAAAAACA AAAATTCTATTATTCATGAAAGAAGAAAAGGCATACACTAA
Upstream 100 bases:
>100_bases TATAGAACTTACTACTAACTTGTGTTAACTTTTATTAGACTTCTTTCGAAACTAGAGAATGATGTAGAATAGTGTTATAA AGATCTGATTTGAGGTAATA
Downstream 100 bases:
>100_bases AAACTCAAATAGTGGTAGACAAGAAAACCCACCAAGTAATATGTATAGTCATTTACAATGAAGTTTGCGTATAAAATATC ATGTTGGTAAATCTTATGAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKFDQIKQLKDEKFRRLTGVRKGTFSKMVDILRKADDLKKSKGVRKNKLDLEEQLLMGLEYLREYRTYFHIGQNYGISES SAYKDVKWVEEDTIVKHPNFALPGRKALMKSDMNYEVVLIDATESPIERHKKNKNSIIHERRKGIH
Sequences:
>Translated_146_residues MKFDQIKQLKDEKFRRLTGVRKGTFSKMVDILRKADDLKKSKGVRKNKLDLEEQLLMGLEYLREYRTYFHIGQNYGISES SAYKDVKWVEEDTIVKHPNFALPGRKALMKSDMNYEVVLIDATESPIERHKKNKNSIIHERRKGIH >Mature_146_residues MKFDQIKQLKDEKFRRLTGVRKGTFSKMVDILRKADDLKKSKGVRKNKLDLEEQLLMGLEYLREYRTYFHIGQNYGISES SAYKDVKWVEEDTIVKHPNFALPGRKALMKSDMNYEVVLIDATESPIERHKKNKNSIIHERRKGIH
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 17269; Mature: 17269
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDQIKQLKDEKFRRLTGVRKGTFSKMVDILRKADDLKKSKGVRKNKLDLEEQLLMGLE CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNYGISESSAYKDVKWVEEDTIVKHPNFALPGRKALMKSDMNYEVVLI HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCHHHHHHCCCCEEEEEE DATESPIERHKKNKNSIIHERRKGIH ECCCCHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MKFDQIKQLKDEKFRRLTGVRKGTFSKMVDILRKADDLKKSKGVRKNKLDLEEQLLMGLE CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YLREYRTYFHIGQNYGISESSAYKDVKWVEEDTIVKHPNFALPGRKALMKSDMNYEVVLI HHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCHHHHHHCCCCEEEEEE DATESPIERHKKNKNSIIHERRKGIH ECCCCHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]