Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183244

Identifier: 189183244

GI number: 189183244

Start: 347930

End: 350077

Strand: Direct

Name: 189183244

Synonym: OTT_0337

Alternate gene names: NA

Gene position: 347930-350077 (Clockwise)

Preceding gene: 189183243

Following gene: 189183245

Centisome position: 17.32

GC content: 34.17

Gene sequence:

>2148_bases
TTGAATAAAATAAGCTTTAAACATGGATATGCTACAACAGTTTGTAACCCACAAACAGCTGTCAAAAAAGATGTATATGT
TCTTCATAATAATGGTGTAGGAATAGAAAGTTCTAACATAAGCATGATAGGGAATGCAGAGCAAGTACGGCTGTACTACA
ATGTGCAAGCTACAAAAAATGTTGCTAACCTAATAGAGCAGCTTAGCACAGCTAAGACAGACTCTATCAATTCAAAAGAG
GAGAATAATGATGTTCAAGCAAATGAAGTAAGGCAATATCAATCTGCTCAAAACTATAGAAAAAACGATTATTATTCAAA
TAGCGAGGAAGACCTACAAAAATTGAGGGATGCAATAGCTTATAGAGCTGACACTATAGCTTGTGATCTTCTTGGAGATC
CAAATAAGCGCCTATCTACATACGGAAAAATACGTTGGGGAGACACTGGCAAAATACAAGTAACCACCGAGGGCAAGTAC
GCTGGAAAATGGTATGACTTTAGTACAGGACAAAAGGGTGATTTATTATCCCTGGTTCAAAGAGAAAGAGTATGCAGCTT
TTTTGAGGCAAGGGAATATTTGAAAAGTATGGTTGGAATGTCTAATATTAGTCAACGGTATCAGAGACCGCCTAAGACTG
ACGATTCTCAACAATACACTCAACAATCTGAAAGTGTTAAAATCGCAAAAGTTCAAAACTTGTATGAACGATCAAGCAGA
ATACATGGTTATGAGATAGATACGAGCCCAAGCGCAGAAGTTGAAATAGTAAAAAAGTATCTTGAAAATCGTGGTATTAC
TTTTGACAAAAGCACCGCAAGTTCAGACTTAAAAGCAAGTATACTGTTTGATACTCAAACTAGAGAAAATTATCCAGCAT
TTACAGCATTTGCAAGAAATTCAAAAGGAGAAATTACCGGAGTACAGGCCGTATATCTAAATTCGGCAGGAGATAAGGCG
AATATTTCAATTAACAGAAGATCTTTCGGTAAAATCAGAGGATCGTTCATAACAATCGCAAAGCGAAATGCGAATGACCC
TAATATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTGCAGCAATCAGGCATTGAAGGTAATATCATTGCTA
GTGCAGGAATTTCGAATTTGACAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATAATGATAGCAAA
AATCCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGTATAGTCAAACC
ACCAGAAAATGGTGATTTTAATAATCTGCTGCAAACTTGTGGAGACCAGTCAATTAGAGACATTATAGAACCTGAAATTA
CTAAACTGACTAAGGCAGTTGAAACAACCAAACTTACTCAAACAGAAAATAATAGTATAGCAAAACAAAATGATATTACT
AATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTACTTTAAACAAGAAGAGGAAGCTAAGGTGGAAACGATAGT
AGTAAACAAATTTTTAGAAAACCATACAGGAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAGGGCAAATATGG
TTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAATTACTGGAGCT
AAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATATTCCAGAAAAATCTGTTGGTACAATTAGTGGATCATT
TGCTGAAATTGCTCAACAAAATCCAAAATACTCACCTGTAATAATCATTACAAAGGATATTGAAACAGCGTTAACCATTC
AGCAAGCTAGAGTCGAAGGCAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTGGCCCAAAAGAA
AAGATCATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGATAAGGAAGCAGTAGTCTG
CACAGTCAAAAATGACTTCAATAATGTATTGAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAGCCCTGAAATAA
GAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAACCAGGATTATGTCCGAAACACTAG

Upstream 100 bases:

>100_bases
GACCAAATGAGAAATCAGCTAGCATCACTCTGAAAACTGCTAATGTGATGAAAATAAGTTTGTAGCTAAGACAGATACAG
GAAACGAGGTAAGCTTTGAT

Downstream 100 bases:

>100_bases
GCAGAGTATGACACAGCATTTTTTATTAAAAAAACTATAGAGTGAAAAAATATGACAAAACAATTAAAGCATGATTCATT
GGCAAAGACAATCATGAGTG

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraA; Conjugal Transfer Protein TraA; MobA/MobL Family Protein; Conjugative Transfer Relaxase Protein TraI; Protein TraI; DNA Helicase

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE
ENNDVQANEVRQYQSAQNYRKNDYYSNSEEDLQKLRDAIAYRADTIACDLLGDPNKRLSTYGKIRWGDTGKIQVTTEGKY
AGKWYDFSTGQKGDLLSLVQRERVCSFFEAREYLKSMVGMSNISQRYQRPPKTDDSQQYTQQSESVKIAKVQNLYERSSR
IHGYEIDTSPSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNSKGEITGVQAVYLNSAGDKA
NISINRRSFGKIRGSFITIAKRNANDPNITIIAEGAETALSLQQSGIEGNIIASAGISNLTNYSPFPGEKIIIAADNDSK
NPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDIT
NVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGA
KILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPVIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKE
KIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH

Sequences:

>Translated_715_residues
MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE
ENNDVQANEVRQYQSAQNYRKNDYYSNSEEDLQKLRDAIAYRADTIACDLLGDPNKRLSTYGKIRWGDTGKIQVTTEGKY
AGKWYDFSTGQKGDLLSLVQRERVCSFFEAREYLKSMVGMSNISQRYQRPPKTDDSQQYTQQSESVKIAKVQNLYERSSR
IHGYEIDTSPSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNSKGEITGVQAVYLNSAGDKA
NISINRRSFGKIRGSFITIAKRNANDPNITIIAEGAETALSLQQSGIEGNIIASAGISNLTNYSPFPGEKIIIAADNDSK
NPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDIT
NVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGA
KILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPVIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKE
KIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
>Mature_715_residues
MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKNVANLIEQLSTAKTDSINSKE
ENNDVQANEVRQYQSAQNYRKNDYYSNSEEDLQKLRDAIAYRADTIACDLLGDPNKRLSTYGKIRWGDTGKIQVTTEGKY
AGKWYDFSTGQKGDLLSLVQRERVCSFFEAREYLKSMVGMSNISQRYQRPPKTDDSQQYTQQSESVKIAKVQNLYERSSR
IHGYEIDTSPSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNSKGEITGVQAVYLNSAGDKA
NISINRRSFGKIRGSFITIAKRNANDPNITIIAEGAETALSLQQSGIEGNIIASAGISNLTNYSPFPGEKIIIAADNDSK
NPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDIT
NVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGA
KILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPVIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKE
KIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79594; Mature: 79594

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKN
CCCCCCCCCCEEEECCCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEEECHHHH
VANLIEQLSTAKTDSINSKEENNDVQANEVRQYQSAQNYRKNDYYSNSEEDLQKLRDAIA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
YRADTIACDLLGDPNKRLSTYGKIRWGDTGKIQVTTEGKYAGKWYDFSTGQKGDLLSLVQ
HHHCEEEEEECCCCCHHHHCCCEEEECCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHH
RERVCSFFEAREYLKSMVGMSNISQRYQRPPKTDDSQQYTQQSESVKIAKVQNLYERSSR
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCC
IHGYEIDTSPSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARN
CCCEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECC
SKGEITGVQAVYLNSAGDKANISINRRSFGKIRGSFITIAKRNANDPNITIIAEGAETAL
CCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHH
SLQQSGIEGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGA
HHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCE
ITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDIT
EEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCH
NVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCC
KSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPV
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE
IIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLE
EEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHC
DKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
CCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKISFKHGYATTVCNPQTAVKKDVYVLHNNGVGIESSNISMIGNAEQVRLYYNVQATKN
CCCCCCCCCCEEEECCCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEEECHHHH
VANLIEQLSTAKTDSINSKEENNDVQANEVRQYQSAQNYRKNDYYSNSEEDLQKLRDAIA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
YRADTIACDLLGDPNKRLSTYGKIRWGDTGKIQVTTEGKYAGKWYDFSTGQKGDLLSLVQ
HHHCEEEEEECCCCCHHHHCCCEEEECCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHH
RERVCSFFEAREYLKSMVGMSNISQRYQRPPKTDDSQQYTQQSESVKIAKVQNLYERSSR
HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCC
IHGYEIDTSPSAEVEIVKKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARN
CCCEECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECC
SKGEITGVQAVYLNSAGDKANISINRRSFGKIRGSFITIAKRNANDPNITIIAEGAETAL
CCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHH
SLQQSGIEGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGA
HHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECCE
ITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDIT
EEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCCH
NVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQ
HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCC
KSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPV
CCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE
IIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLE
EEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHC
DKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
CCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA