| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183237
Identifier: 189183237
GI number: 189183237
Start: 341931
End: 342305
Strand: Direct
Name: 189183237
Synonym: OTT_0330
Alternate gene names: NA
Gene position: 341931-342305 (Clockwise)
Preceding gene: 189183236
Following gene: 189183238
Centisome position: 17.02
GC content: 30.4
Gene sequence:
>375_bases ATGAAAAAGTTAAATAATCTTTCAATTGAGAGGAAAAGAGCACAGCAGCTTGTTAAGTTTGCAAAAATAAACTTACAAAA TATACAAAAAAAGAATGAGGAATATAATAAGAAATTTTTGGCTGAATTAGTCACTGACATGACGCAAGGGTATAATGATG ATCAAAAAATTAAACGTATGGAGAGTAAGATAGAAAAGTACTCAAGTAAGTTTAAATCTTTAATGCAGAAGGATCAATCT GGAAGTAGAAGTAAGGATTTAGATTATGTAACTAATGAAATATCAGAATGTGCAATGAAAGTTCGTTTAGCATTTGAGGA GCAAGTAGTAAAGTACTGCGGAGAAGAAAATCTTATCAATGACTGGGATATGTGA
Upstream 100 bases:
>100_bases TATCATTTCTTTACTTTTTTGGAGGTTCTGTTATTAATATAGTAAATCTGCAAAATATTGGGTGAATAAAATGCAATATA TTGAATTCAAAAGTACCTGC
Downstream 100 bases:
>100_bases GTAGATAGCTTTATAAGGGATGAATGAATTACAGGATGTCTTTTTTTGTGATAGGTAAGCTTATATGTATCAATAAAGTA TCTTCTTAAATTAAGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKKLNNLSIERKRAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKYSSKFKSLMQKDQS GSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM
Sequences:
>Translated_124_residues MKKLNNLSIERKRAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKYSSKFKSLMQKDQS GSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM >Mature_124_residues MKKLNNLSIERKRAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRMESKIEKYSSKFKSLMQKDQS GSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLINDWDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14715; Mature: 14715
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNNLSIERKRAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ESKIEKYSSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLIN HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWDM CCCC >Mature Secondary Structure MKKLNNLSIERKRAQQLVKFAKINLQNIQKKNEEYNKKFLAELVTDMTQGYNDDQKIKRM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ESKIEKYSSKFKSLMQKDQSGSRSKDLDYVTNEISECAMKVRLAFEEQVVKYCGEENLIN HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DWDM CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA