| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183233
Identifier: 189183233
GI number: 189183233
Start: 335544
End: 336482
Strand: Direct
Name: 189183233
Synonym: OTT_0326
Alternate gene names: NA
Gene position: 335544-336482 (Clockwise)
Preceding gene: 189183232
Following gene: 189183234
Centisome position: 16.7
GC content: 29.61
Gene sequence:
>939_bases ATGCATTTATCAAGATTTCTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT ACTAATACATTTTCTGAACGATATATTGTTGTTTGAAGGAAATAGAGAAATAACAGAAGTGGAGTTTTTAGGAACTATAT TAGATGCAGACATAGCGTCCAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGCGCGCAATATATAATA GAAATGCAAGTAGATCCTACACAAGGATTTGAAAAAAGAGCTCAGTATTATGCCGAAAAAGCATATGGTAGGCAACCAAA TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAATA AAGAAGACTATATATCAAGGCATGTAATACTGGATAAAAAAACATATGAGCATGATTTAAAAGACTTTTCATTTACCTTT ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAGTTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA TGCAAAAGAAACAACATTAGATGGATATAATAAAATAATAGGTGAAGATTTAATAATAAAAAGAGCTTATGAAGCATTAG ATCAGTTTAACTGGAGCGAAGATGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTCGAA GATTATAAACTCGAACGCGCTAAAGCTGAAGGTAAAGCTGAAGGCATAAAGCTCGGTGAGATTAAAGGTAAAGCTGAAGG TAAAGCTGAAGGTAAAGCTGAAGCAAAAAAAGATTTGGCAATAAAATTATTGAAATCTGAATTATCAGTTGAGACAATTG CTGAATATACGGATTTATCAATACAAGAAGTATTAAATTTAAAAAATAGTGTAAAATAA
Upstream 100 bases:
>100_bases GTTAATGTAGTGAATTGCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTACTGTATAATTTAAAAAGA ATAGAAAAAATGAAAAATAT
Downstream 100 bases:
>100_bases TAATATACTTCTTTCGAAACTATAGTCATTTACAATGAAGTTTGCGTATAAAATATCCTGTTGGTAAATCTTATGATGCT ATTGTCGCTTTTTTCTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEIKGKAEGKAEGKAEAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Sequences:
>Translated_312_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEIKGKAEGKAEGKAEAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK >Mature_312_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGEIKGKAEGKAEGKAEAKKDLAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36236; Mature: 36236
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGEIKGKAEGKAEGKAEAKKDLAIKLLKSELSVETIAEYTDLS HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IQEVLNLKNSVK HHHHHHHHHCCC >Mature Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAEKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIIGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGEIKGKAEGKAEGKAEAKKDLAIKLLKSELSVETIAEYTDLS HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IQEVLNLKNSVK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA