| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183211
Identifier: 189183211
GI number: 189183211
Start: 318669
End: 319436
Strand: Reverse
Name: 189183211
Synonym: OTT_0304
Alternate gene names: NA
Gene position: 319436-318669 (Counterclockwise)
Preceding gene: 189183225
Following gene: 189183210
Centisome position: 15.9
GC content: 33.72
Gene sequence:
>768_bases ATGAGGGATGTTTATAGTTTTATTACAAAAGCGGTTCAACAAGTTACATCCAACACTACTAGTTGGATGAAGGATTGCAT GCTTATTCCAGGTGACAGTATCAGCGAAGTATTGATTTCTGGTGCTGATGCTGCTGGTAAGATCGCTTTCAAATGTTACA GCATATGTGGACGTATGTTTATTAATTATCTGAATAAATTTAATAGTAGTTATATCAATAGCATTGATGGTCCTTATAGT CCTATGACAGTTTTACACAGCATTGCTTCTGATGAATTTGGCGTCATCAAGTATAGCCCAAACTTGAATTTAATTTTTCC TGCTAATTTTACGTCAGTAATAAATGATAACAACATACTTGTCGCTAAAGTACATGCCAGTAATAATTATGACATAAATG CTACTCTAATAGAGTGGAGCAGACAAGGATGTAAAGTAATATCAGAGTGTAGTATAGAGTTATTAGTAGATAGTTATAAT GAAATGAATGCTAATAATGATGAAAGCAATTTGTCAACAGCGTCATGGATATTGGGAGGATCATGTGTATTAGCTGCTGC TGGTGGCATTGCTGCTTTGGTAGCATACAAAAAAACCAAAAAAAATGCAGATATAAATATTAATATTGATCACATTGAAG AAACGAAAAAGTACGAAAACATGCATGAGCTACCAATAATGGAAACAGTAATGAAAGTAGTAGCAGAAGATCAATATGAA GTATTCGGAGCAGCAAAAGATAGTAGCGTAGAGATCGTAATATCTTAA
Upstream 100 bases:
>100_bases AAATTAAAGTCAGAATGTTACCATAAATTAATTGATAATTATAAATTTATAACATAAAATTACTTCTATAAAATTTTAAT TAATTAACGGAGTGATTGCA
Downstream 100 bases:
>100_bases GTTTTTTTATCTATTTGGTATCAAAGTAGTATCACAGGCATAAATATTAAGATAGAAACATAGAAGAAATGCAAGAAGTA TAATTTCTGTGTTTCTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE VFGAAKDSSVEIVIS
Sequences:
>Translated_255_residues MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE VFGAAKDSSVEIVIS >Mature_255_residues MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE VFGAAKDSSVEIVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28032; Mature: 28032
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMF CCHHHHHHHHHHHHHHCCHHHHHHCCEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH INYLNKFNSSYINSIDGPYSPMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNIL HHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCHHEECCCCEE VAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYNEMNANNDESNLSTASWILGG EEEEECCCCCCEEEEEEEECHHHHHHHHHCCHHEEEECHHHCCCCCCCCCCCHHHHHHCC SCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE HHEEHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHH VFGAAKDSSVEIVIS EEECCCCCCEEEEEC >Mature Secondary Structure MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMF CCHHHHHHHHHHHHHHCCHHHHHHCCEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH INYLNKFNSSYINSIDGPYSPMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNIL HHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCHHEECCCCEE VAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYNEMNANNDESNLSTASWILGG EEEEECCCCCCEEEEEEEECHHHHHHHHHCCHHEEEECHHHCCCCCCCCCCCHHHHHHCC SCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE HHEEHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHH VFGAAKDSSVEIVIS EEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA