| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183206
Identifier: 189183206
GI number: 189183206
Start: 309141
End: 309386
Strand: Reverse
Name: 189183206
Synonym: OTT_0299
Alternate gene names: NA
Gene position: 309386-309141 (Counterclockwise)
Preceding gene: 189183207
Following gene: 189183199
Centisome position: 15.4
GC content: 29.27
Gene sequence:
>246_bases ATGATCAGTCAGAGAACTAATGTTATAGAAGCATTAGTAGATAAATCTCTGCTAGCAGTATCAATTTTTGACTGCAATGT TAATACTGCTATTTTTAACCGTTGTATAGAACAGAATTTAATTCCTAAATTACCTAATAATTCTGTAGTTGTAATGGACA ATCAAAGTTTTCGTAAAAGTTCGCATTTAGACACTATGATAGAAAAAGATGGACATATTAGAGTATTTACCTTCTTATTT TCCTGA
Upstream 100 bases:
>100_bases AAAGGAAAAGTTATTATCTTTACGGATGAGGGGAGTTTTGTTCATAGTACCACTAGAACTCATAAATATGCAGCAAAAGG CATGAGATGTTATTGCGTTT
Downstream 100 bases:
>100_bases TTTAAATATATTGAAAAAAATGTCTTCAAGCTCAATCAAGCAGAATAAAATATAACTATGACTTAGATACACTTTTCAAA AAGTATATAACATAACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MISQRTNVIEALVDKSLLAVSIFDCNVNTAIFNRCIEQNLIPKLPNNSVVVMDNQSFRKSSHLDTMIEKDGHIRVFTFLF S
Sequences:
>Translated_81_residues MISQRTNVIEALVDKSLLAVSIFDCNVNTAIFNRCIEQNLIPKLPNNSVVVMDNQSFRKSSHLDTMIEKDGHIRVFTFLF S >Mature_81_residues MISQRTNVIEALVDKSLLAVSIFDCNVNTAIFNRCIEQNLIPKLPNNSVVVMDNQSFRKSSHLDTMIEKDGHIRVFTFLF S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9229; Mature: 9229
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQRTNVIEALVDKSLLAVSIFDCNVNTAIFNRCIEQNLIPKLPNNSVVVMDNQSFRKS CCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC SHLDTMIEKDGHIRVFTFLFS CCHHHHHCCCCCEEEEEEEEC >Mature Secondary Structure MISQRTNVIEALVDKSLLAVSIFDCNVNTAIFNRCIEQNLIPKLPNNSVVVMDNQSFRKS CCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCC SHLDTMIEKDGHIRVFTFLFS CCHHHHHCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA