| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183147
Identifier: 189183147
GI number: 189183147
Start: 226507
End: 226629
Strand: Reverse
Name: 189183147
Synonym: OTT_0240
Alternate gene names: NA
Gene position: 226629-226507 (Counterclockwise)
Preceding gene: 189183148
Following gene: 189183146
Centisome position: 11.28
GC content: 32.52
Gene sequence:
>123_bases ATGCAACCTATCATCACCTATTCTGCAATTAATACTTGCAAAACTACTAATAATAGCAGTGGCAATAATACAACAGTATT GTTTCGTTTTGTTGAAAAATTTCCACCAGAAGAATGGAGATAG
Upstream 100 bases:
>100_bases TAAAATATTTATGTGACTAATATGCTGTGTAACAATAATAGTTTTAGAGCAAAAATAATTCTAAAACTCCTGCCATATTG GATATTTCAGGAGGAAAAAT
Downstream 100 bases:
>100_bases TTAACAGATGCTGATGGAAAAGCTTTAGGAAAAACTGAAAAGCAGTTGCTAGGAGTAATAGTTCATCAACTATAAGTATA TAATAATAAAAATATAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MQPIITYSAINTCKTTNNSSGNNTTVLFRFVEKFPPEEWR
Sequences:
>Translated_40_residues MQPIITYSAINTCKTTNNSSGNNTTVLFRFVEKFPPEEWR >Mature_40_residues MQPIITYSAINTCKTTNNSSGNNTTVLFRFVEKFPPEEWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4636; Mature: 4636
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPIITYSAINTCKTTNNSSGNNTTVLFRFVEKFPPEEWR CCCEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCC >Mature Secondary Structure MQPIITYSAINTCKTTNNSSGNNTTVLFRFVEKFPPEEWR CCCEECCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA