| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183145
Identifier: 189183145
GI number: 189183145
Start: 224907
End: 225371
Strand: Reverse
Name: 189183145
Synonym: OTT_0238
Alternate gene names: NA
Gene position: 225371-224907 (Counterclockwise)
Preceding gene: 189183146
Following gene: 189183144
Centisome position: 11.22
GC content: 29.89
Gene sequence:
>465_bases ATGAAGGCTCAGTTGAAGCGTAAAATAGCTGGAGTCTTTGAAGCAGATATGGCTTATAAAATTTTAACATCTTGTGATTT TGGGGCAGCGGTTAAAAACAAATATTACATCAAGTTGCTTAAGAATATTTTACTATCAGATAATATTAAATTCAAGATAT TACAGGAGGTACGAGCTGTACATGGCAACGATATTGAGCAGTTACAAGTTATACCATTTAATGAATCAAAACAAGTTACT AATAGCACAACGGAGTATCAAAAAACAACAGTTTTACAGCAACGAATAAGTGATGAAGATTACCTTTCAGAACTTAGTAA AGAGCTAGGCTCTAACTCTATATTATTCAAAGTACGAAAATACATACTTCAACATTACGAATATGAGCAAGTTATTGATA AAATATGGTTTAGTAAATTAGAAGTTGCAAATGAAGATAATGTTAATAAAAAAGATATTCATTAA
Upstream 100 bases:
>100_bases AACTACTGATCAGGCTAATAGTTGAAATTTTAGATTTAATGATGTAGGAAGATTTAAAGAACAGTATCTAGCAAATATTG AATCTAGTACAGATCGTAGT
Downstream 100 bases:
>100_bases GGCTCTAACAAGCTTTGCAGATAGCTATATCAAATCAAATTATAAGCCTATTCTAAAGCGTGCTTTTGAAGCTCAAGGCG GGATTTTCGTTTGAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKAQLKRKIAGVFEADMAYKILTSCDFGAAVKNKYYIKLLKNILLSDNIKFKILQEVRAVHGNDIEQLQVIPFNESKQVT NSTTEYQKTTVLQQRISDEDYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWFSKLEVANEDNVNKKDIH
Sequences:
>Translated_154_residues MKAQLKRKIAGVFEADMAYKILTSCDFGAAVKNKYYIKLLKNILLSDNIKFKILQEVRAVHGNDIEQLQVIPFNESKQVT NSTTEYQKTTVLQQRISDEDYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWFSKLEVANEDNVNKKDIH >Mature_154_residues MKAQLKRKIAGVFEADMAYKILTSCDFGAAVKNKYYIKLLKNILLSDNIKFKILQEVRAVHGNDIEQLQVIPFNESKQVT NSTTEYQKTTVLQQRISDEDYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKIWFSKLEVANEDNVNKKDIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17981; Mature: 17981
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQLKRKIAGVFEADMAYKILTSCDFGAAVKNKYYIKLLKNILLSDNIKFKILQEVRAV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HGNDIEQLQVIPFNESKQVTNSTTEYQKTTVLQQRISDEDYLSELSKELGSNSILFKVRK CCCCCHHEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH YILQHYEYEQVIDKIWFSKLEVANEDNVNKKDIH HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKAQLKRKIAGVFEADMAYKILTSCDFGAAVKNKYYIKLLKNILLSDNIKFKILQEVRAV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HGNDIEQLQVIPFNESKQVTNSTTEYQKTTVLQQRISDEDYLSELSKELGSNSILFKVRK CCCCCHHEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH YILQHYEYEQVIDKIWFSKLEVANEDNVNKKDIH HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA