| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183142
Identifier: 189183142
GI number: 189183142
Start: 223065
End: 223721
Strand: Reverse
Name: 189183142
Synonym: OTT_0235
Alternate gene names: NA
Gene position: 223721-223065 (Counterclockwise)
Preceding gene: 189183143
Following gene: 189183141
Centisome position: 11.14
GC content: 29.22
Gene sequence:
>657_bases ATGACTCCTATAGATCATGCTAATGAATACAGATGTATTCACTCTTCTAACGCAACAATCTGTCCTATAGTTATTAGTTT TCAACAGACAGCTAATATGTTAATTCTAAAAAAAGAGAAGTTAATTATGAATGTTTTGAAATCACTTTTACAACCGTGTT ATGCTGTTATGCTAGCATCTGTTGTATTATTTTTACCATCAATATGTACAGCAAATAATACAAACGCAGCTATATTATTT TTTCCATCTACACATGTAGTGAATGATAATATAAAAATTGATTCTTCGCCATTTTACATAAAATTTTCAGCAGGTATTGT TAATACAAGTCGTATATTAGAGGCAGGATTAGGTTACAGGCTAAATCGACATAGAATGGATATAAGACTAGGATTTATGG TTAATATCCTTAAAGCATATAATTTTGTCCAAGGAAATTATTATTATAATATAATTACTGGTAATATAGGATCAATTTTT GCTACAGGTGGCATAATGTCAGTTTTTAAGGAAGGTATTAGAGGAGAGTTGGGAATTGGCATAGCAGTAGATTTATATGA TATATATTATACAGATATTGAATTTGGTGGTACATATAATAATAGCGATAATTCACTTCCTTTTTATATACGTTCTGGAT TTCGTTTGCATTGTTGA
Upstream 100 bases:
>100_bases GAGAAATACTACTACATATTGTTGCTCGTTATCAAAGAACAGATGTTATACAGCTTTTGATTGATTATGGTGCTGATATT GATGTAAAAGATAAAACTGC
Downstream 100 bases:
>100_bases ACGAAATGAGTTTAGTAGTTAGTAATGATTAGCTCATTAACGAGAACGAGATTTCGTTGTTCATTGATTGAGTACGTAAG TCCAATATGAGTGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILF FPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIF ATGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC
Sequences:
>Translated_218_residues MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILF FPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIF ATGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC >Mature_217_residues TPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILFF PSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFA TGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24397; Mature: 24265
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLAS CCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH VVLFLPSICTANNTNAAILFFPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYR HHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCEEEEEECCCCCHHHHHHHCCCCE LNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFATGGIMSVFKEGIRGELGIG ECCEEEEEEHHHHHHHHHHHCEEECCEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCE IAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC EEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEECC >Mature Secondary Structure TPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLAS CCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH VVLFLPSICTANNTNAAILFFPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYR HHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCEEEEEECCCCCHHHHHHHCCCCE LNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFATGGIMSVFKEGIRGELGIG ECCEEEEEEHHHHHHHHHHHCEEECCEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCE IAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC EEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA