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The map label for this gene is trbC [C]

Identifier: 189183135

GI number: 189183135

Start: 217167

End: 217487

Strand: Direct

Name: trbC [C]

Synonym: OTT_0228

Alternate gene names: 189183135

Gene position: 217167-217487 (Clockwise)

Preceding gene: 189183134

Following gene: 189183136

Centisome position: 10.81

GC content: 31.46

Gene sequence:

>321_bases
TTGGATCAGCAAAAAACTTTTATTTTTGTCTCATTTTCAATGAGTGATGAGGCTTTAAAAAGCTATTTTGCTGATTCTCA
AAAGGCTGGAGCTCAATTAGTGATGCGTGGATTAATTAATAACTCATTTACACAAACAAAGAATAAAACTATGGAGCTTG
GTATTAGCTTCGATATAGATCCTAGCTTGTTTGAACAATATAAAATTGATGTTGTACCTGTGATAGTAATAGATGATGAA
AAAAGAGGATTAACCAAGAAATTAACTGGCCATATTCCTTTAGCAATAGCATTAGAAATTATGGAGAACAATACTCCATG
A

Upstream 100 bases:

>100_bases
TTGTTGTTTGCTTTGATTTATAAAGCTTGGAGAGGAATATGGTTATACGAGTAATGATGTTGATGGTTTTATTATTTGTT
AATAATGCTAATGCTTTTTT

Downstream 100 bases:

>100_bases
GATTATTTTCTATATTAACTTTAATAACGCTCAATATTAGCTGTTGTTTAGCTTCAATGCAGAATGACTATAATGAAGCT
AAAAACTATAATGTAAATCT

Product: putative conjugative transfer protein TrbC

Products: NA

Alternate protein names: Conjugative Transfer Protein

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDQQKTFIFVSFSMSDEALKSYFADSQKAGAQLVMRGLINNSFTQTKNKTMELGISFDIDPSLFEQYKIDVVPVIVIDDE
KRGLTKKLTGHIPLAIALEIMENNTP

Sequences:

>Translated_106_residues
MDQQKTFIFVSFSMSDEALKSYFADSQKAGAQLVMRGLINNSFTQTKNKTMELGISFDIDPSLFEQYKIDVVPVIVIDDE
KRGLTKKLTGHIPLAIALEIMENNTP
>Mature_106_residues
MDQQKTFIFVSFSMSDEALKSYFADSQKAGAQLVMRGLINNSFTQTKNKTMELGISFDIDPSLFEQYKIDVVPVIVIDDE
KRGLTKKLTGHIPLAIALEIMENNTP

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11918; Mature: 11918

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQKTFIFVSFSMSDEALKSYFADSQKAGAQLVMRGLINNSFTQTKNKTMELGISFDID
CCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC
PSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMENNTP
HHHHHHCCEEEEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MDQQKTFIFVSFSMSDEALKSYFADSQKAGAQLVMRGLINNSFTQTKNKTMELGISFDID
CCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCC
PSLFEQYKIDVVPVIVIDDEKRGLTKKLTGHIPLAIALEIMENNTP
HHHHHHCCEEEEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA