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The map label for this gene is traC [H]

Identifier: 189183132

GI number: 189183132

Start: 213629

End: 215431

Strand: Direct

Name: traC [H]

Synonym: OTT_0225

Alternate gene names: 189183132

Gene position: 213629-215431 (Clockwise)

Preceding gene: 189183131

Following gene: 189183134

Centisome position: 10.63

GC content: 36.55

Gene sequence:

>1803_bases
GTGAACGCAAGCATACATAAGGATTTTGATCGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGAC
TCAGCTATTCTTTAATCGTTGTTCAATAGGCTTTGTATTGCTTGCATGCCCATTGGCTGAAGCTAGTGTTTCGGCTCAAA
ATGAAATTGCTGAATTTCTGAAAAGCGATGAAAATTTACCTGCTGAAAGTAGCCTTCAAGTATTGATGATTGGTAGTAAT
AATATAGAGAATTTTTTAAGCAACTGGCAGTCATATCGTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGA
GTTTTTGCGTGATCAAGCTCAAAAAGTAGGTTCTATAAAGGATGTAGTATTGTTAATTTCAGTTACTATACCTAATTTAA
ATGCAAATATCGATGATATGATTCGCAGACGAGATGCTTTAAAAGATACGTTTAGGTCAATTGGATTAAGCACTGAAAAT
GTGAATGCGCAGCAATTATTAAAGTTTCTGAGAGTAATATTTGGCTGGCCTGAAGAAGAACATTCAAATATTAACCAGTA
TGAAATATTGTCTGAACAAATTCTAAGTGGAGATTTTTCGTTATTTGAGAATGATGATTGTGTAAATGTAAATGATGATC
AAATATTTATCAGTCTAGAAGCAAGAAAGAGGCCTGCAGAGTGGAAATTATCTGCTATGGATCTGTTTTTAGGTAATGAA
ATGCGTCGTGATGAATATATAAAATCAAATTTCCTGATTCATTTTGGTCTGCAAATTTTACCAAATCAAGCGATGGAAAG
GACTGCTGCCATAACTAAAAGAGAAGCGCTAGAAAGAAATATTAATGCGGGAATGGGTAAATTTTTTCCTGACATACAAC
AAGAAGCTGCTGATTTAGCTGGTGTAGTAGCTGCTTTACAGAGTGGTGATAGAGTCGTTAATATTCACTTCAATGTTATT
ATGTTTGACAAAATAAAAAAAGCTAAGCAATCTGCATCGGCCTTTTGTTCGATGTTAAGGCGCAGTGGATGGTATTTTGT
GCCATGTAAATATGATCATGTGGCCGTGTTACTAGCTGCACTACCAATGCAATTAGTTGAACAAGGCCCAAAAGGTATAT
TGGGTCAAAAAACATCAGGAGTTGGAGTAGCACTTTCTAGCTTAGGTAGAGGCATAAAAACTGTTTCTGTAGAGAGTAAA
GTATTATTGCCAATCATTGGTGAATGGAAAGGTGATTTAAGCTCTCCAGGTATGTTGCTAGCTGGAAGACGAGGTCAAAT
AATGTACTGGTCGCCTTTTGGTGGAGCTTTATTACCTGCATTAAATAAGCATGGGGTAGCTCCAAATGAGAACTTTAACC
TTTGTATAGCTGGAGTTCCAGGGTCTGGAAAATCTGTTTTTATGCAAGAATTAATGCTATCAGTTCTAGGAGTTGGTGGG
AAAGTTTTTGCTCTTGATTACGGAAGATCATTTAAGCGTACATGCTTGATTCTAGGAAGCAGCTACATAGAATTTGACAT
GAAAAATCCTGTATCAATTAATCCATTTTCCGAAGTGCCAGAAGATGATAGTGCAAAGTCTATAGAGGCTAGATCCGACT
TTTTATCTAACTTTCCATCCATTTTAGCTACTATGGCTGCACCTCAGTATGGAACAAGCGATCTACAGCAACCAATGCTA
CAGAGTGCTTTAACACTTGCGCTACTCTCCCTCATATATAGCATATGCTCCTTCAACTTCAGCTTCAACTTCAGCACCAG
CTTCACCAGCTTCTGCTACATCAGTGCGTTGAATTTTTGTTAA

Upstream 100 bases:

>100_bases
AGGCAAGCTAAAGCTATTCAAAGCGTAGCTGTTGTTAATAAGTTGCCGAAAAAACCAAAAAAATATCTTATTAATTTATT
TAAATCAAAACAGAGTCAAG

Downstream 100 bases:

>100_bases
ATCATCGTTATCTAAATTCTCTAATATCATAAACCTTACTTCTGGTGGCAAGTGAGACCAAGATGTCTGACTTTTTTGAG
AAGCGTCCTGATTGGATTCA

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QSALTLALLSLIYSICSFNFSFNFSTSFTSFCYISALNFC

Sequences:

>Translated_600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QSALTLALLSLIYSICSFNFSFNFSTSFTSFCYISALNFC
>Mature_600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QSALTLALLSLIYSICSFNFSFNFSTSFTSFCYISALNFC

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 66822; Mature: 66822

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFL
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH
KSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIK
HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHH
DVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVNAQQLLKFLRVIFGWPEEE
HEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH
HSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
HCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCH
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLA
HHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHH
GVVAALQSGDRVVNIHFNVIMFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAA
HHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
LPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCCCEEE
AGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
ECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPS
EEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ILATMAAPQYGTSDLQQPMLQSALTLALLSLIYSICSFNFSFNFSTSFTSFCYISALNFC
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFL
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH
KSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIK
HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHH
DVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVNAQQLLKFLRVIFGWPEEE
HEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH
HSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
HCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCH
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLA
HHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHH
GVVAALQSGDRVVNIHFNVIMFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAA
HHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
LPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCCCCEEE
AGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
ECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KVFALDYGRSFKRTCLILGSSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPS
EEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ILATMAAPQYGTSDLQQPMLQSALTLALLSLIYSICSFNFSFNFSTSFTSFCYISALNFC
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]