Click here to switch to the map view.

The map label for this gene is traU [H]

Identifier: 189183102

GI number: 189183102

Start: 192106

End: 192372

Strand: Direct

Name: traU [H]

Synonym: OTT_0195

Alternate gene names: 189183102

Gene position: 192106-192372 (Clockwise)

Preceding gene: 189183101

Following gene: 189183103

Centisome position: 9.56

GC content: 37.45

Gene sequence:

>267_bases
ATGGTAAGTAAATTTATGGCTAGAATGCATAGGCAACTGATGTTATGGGGATATTATGGTTATAAAGGCCTATGTGGTAA
GTATCCTATGCCTATCATGAAGAAAAGCCAGTATCGACTACAAATGACTTATCCGATTCCAGAAACTAAATCCTGTAAGA
GCATAGGTCAAACAGAAGCTATATGGCAAGCTGGTAGAGAATTTCCAGTTAATGGTGAAGATTTCGGTTACTTGATTTGG
CGAAAAAGAGATTGCTGTTTGCAATGA

Upstream 100 bases:

>100_bases
CTGTCGATAAGACTTACTTTCTGACTTACAAGCGAACTCCTAATTACCTTTTATTGAAACTGCTGCAGCGCATAATGGTG
GAGTTGGAACATCTGTATTA

Downstream 100 bases:

>100_bases
AAAAATATACAAGTTAGCATGTGATAGCAAAATGGCCGTAAGACGAATGAGAAATGCTGTTGCTGATAGGCTTGGCGTAT
CTATAGAGCATATTGGTACA

Product: putative conjugative transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVSKFMARMHRQLMLWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIW
RKRDCCLQ

Sequences:

>Translated_88_residues
MVSKFMARMHRQLMLWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIW
RKRDCCLQ
>Mature_88_residues
MVSKFMARMHRQLMLWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIW
RKRDCCLQ

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 10471; Mature: 10471

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKFMARMHRQLMLWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHH
IWQAGREFPVNGEDFGYLIWRKRDCCLQ
HHHCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MVSKFMARMHRQLMLWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCHHH
IWQAGREFPVNGEDFGYLIWRKRDCCLQ
HHHCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]