Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183087

Identifier: 189183087

GI number: 189183087

Start: 175772

End: 177715

Strand: Reverse

Name: 189183087

Synonym: OTT_0180

Alternate gene names: NA

Gene position: 177715-175772 (Counterclockwise)

Preceding gene: 189183090

Following gene: 189183086

Centisome position: 8.85

GC content: 29.89

Gene sequence:

>1944_bases
TTGGATAAATTCGTTTACGATCTAGAGTTAGACAACTTAGAAAAACTACTACAACCAGCTAGATTAATAGAATCTCCTAG
TATTACAAGTATGATATGTAATAATTGTAGGGTCAATCTAGATGTATTAACAGATACATTAAAGGCATTAACTTCAAATA
TTGATATATTAAAAAACTTATACGACTTACACATACATTTTTCTACTATTTCCGGTAAGTACCGTCGTATAGGATCTGAT
GCTCCAGGTCATTTAAAAAATATATTCGAAGATTTTAAGCTAAAGATGAAAAATTGGCCAGGAAATACATATGAAGAAAA
ATGTAAACAAAAAGCGTATTTAGAGTATGTTCTGAATTCTCTCAAAAAAGCGAAACTAAAGTCTTATGATATTAACAGTT
CTAATTATGACGTTGATAATGATATTACGAATCAGACAACGATAAAACAAAATCCATTCGACTTATACATTGCCAACAAC
AATAAATTAGAAGGTTATTCATGGTCTATGAAACTTTTTTTAAGGGGAATTTTTCAAAAATCTTGGGCAGGTACTTACTC
AAATGAAGATTTTGATGGTTTGATTTCTAGTATACAATTAGATAACTTAGAAAAACTACTATCACCAGCTATAATAATAG
AACCTTTCAATATCACAGCTATATTAATCAATCATAATAAACTGAATATACGTGAACTAAAGAAAACATTAAAAGAATTT
ACTTTAAATATTAATACATTAGAAGTTTTATACACACTAAATATACCTTTTTCTACTTTTTTCAGTAAGTTACATCATAT
AGGATCTAAGGCACCAGATTTTTTATATAAAATATTTAAGATTCTTGATATAATGATAAAAGTGCATAAAAATGCCGAAG
AGCGTTTAATATCTTTCTACGCATTAGAACTGACATTAGCTAGTGTGAAAGATAAGTGTCAAAAAGATCGTGAAAACATC
ATAAATAGGCTGCTAGAAAAATATAGCAATAGTCAAGAGCAAAATAACTTAACAATCAATAATCATCAATCTCAGACAAT
AGATGGACACAGAGAAGATGATGATATTGAAACCAATAGTAATGAAATAAATACGCATAGTGATAGTCAAGAATTAGCGG
CTAATATATCAAATTCTGAGCTAACAACTAATGAAATATTAAATAGAGCGCTAGCTATAGATGATAATGATATTAAAGAA
ATAGAACTGGACTTAAACAATGACATTACACATCAATTTGAAAATCAATCACAGACAACAGATAAGTATCTAGAAAATGA
TAGAGAAGATATACTATATCAATCTATGAAAGCTATTGATGGTACTACTTCAAGTAGTTCGAACAGTATATGTATTACTT
CGTATCAGATTATGCCATCGGTAGAAGAAGTAGCGCAGCAACCTATGCAAGATGATATTCAGAACAGTAGTGATGAGATA
AATACACATAGCGATGGTCAAGAGTTAACGGCTAACATGTCAAATTCTGAGCTAACAACTGATGAAATATTCAATAGAAT
GCTAGATATAGATGATGATGATAATATTAAAGAAATAGTACTGAAATTAAACAATTACATTGCCAATCAATCTGAAAATC
AATCTCAACCAATAGAAAGCTATCAAGAAAATAATATTGAAAATTTGCAAATAATAAGAGAGACGCATACTGAAGAAGTT
ATGCAATCAGTAAAAAAGCGAAAATCATGTTATGATGAGCATGAAGATCTTTACACTCGTAAACGTCAGTGTAATAATCC
TGCGTTAAATAGCGATCATGGCACAGAAGTAGCACTAAATGAACAAGATAGCATTAATGTAGATTGCTATACTTTTGGCA
CTATTAGTCATCTAGCCGGCGAATCGATTTGCATCCTTAGTAGTGATACCGAAAGATTCATCATTACTGGTACAGCAGGG
TATTCAGCTTCCATTTTGGAATAA

Upstream 100 bases:

>100_bases
CTTAGGAATAAAATTATTAGAAGCTCATCCGTTCTCTAAGAAATTTTTAAGTCAAATTTTTCAGTACAGGAAAAGATATA
ATACTTACTCAAATAAAAAT

Downstream 100 bases:

>100_bases
GTATTACAAAAGATATCAGATTAAGTAAGAATTAATAATAACTCCAGTTTAGGACAATAAAAAGAGATGGAAAGTATCAG
GCAAAAGCTATACAAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MDKFVYDLELDNLEKLLQPARLIESPSITSMICNNCRVNLDVLTDTLKALTSNIDILKNLYDLHIHFSTISGKYRRIGSD
APGHLKNIFEDFKLKMKNWPGNTYEEKCKQKAYLEYVLNSLKKAKLKSYDINSSNYDVDNDITNQTTIKQNPFDLYIANN
NKLEGYSWSMKLFLRGIFQKSWAGTYSNEDFDGLISSIQLDNLEKLLSPAIIIEPFNITAILINHNKLNIRELKKTLKEF
TLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENI
INRLLEKYSNSQEQNNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKE
IELDLNNDITHQFENQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEI
NTHSDGQELTANMSNSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEV
MQSVKKRKSCYDEHEDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAG
YSASILE

Sequences:

>Translated_647_residues
MDKFVYDLELDNLEKLLQPARLIESPSITSMICNNCRVNLDVLTDTLKALTSNIDILKNLYDLHIHFSTISGKYRRIGSD
APGHLKNIFEDFKLKMKNWPGNTYEEKCKQKAYLEYVLNSLKKAKLKSYDINSSNYDVDNDITNQTTIKQNPFDLYIANN
NKLEGYSWSMKLFLRGIFQKSWAGTYSNEDFDGLISSIQLDNLEKLLSPAIIIEPFNITAILINHNKLNIRELKKTLKEF
TLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENI
INRLLEKYSNSQEQNNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKE
IELDLNNDITHQFENQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEI
NTHSDGQELTANMSNSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEV
MQSVKKRKSCYDEHEDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAG
YSASILE
>Mature_647_residues
MDKFVYDLELDNLEKLLQPARLIESPSITSMICNNCRVNLDVLTDTLKALTSNIDILKNLYDLHIHFSTISGKYRRIGSD
APGHLKNIFEDFKLKMKNWPGNTYEEKCKQKAYLEYVLNSLKKAKLKSYDINSSNYDVDNDITNQTTIKQNPFDLYIANN
NKLEGYSWSMKLFLRGIFQKSWAGTYSNEDFDGLISSIQLDNLEKLLSPAIIIEPFNITAILINHNKLNIRELKKTLKEF
TLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFYALELTLASVKDKCQKDRENI
INRLLEKYSNSQEQNNLTINNHQSQTIDGHREDDDIETNSNEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKE
IELDLNNDITHQFENQSQTTDKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEI
NTHSDGQELTANMSNSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIESYQENNIENLQIIRETHTEEV
MQSVKKRKSCYDEHEDLYTRKRQCNNPALNSDHGTEVALNEQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAG
YSASILE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74214; Mature: 74214

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFVYDLELDNLEKLLQPARLIESPSITSMICNNCRVNLDVLTDTLKALTSNIDILKNL
CCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
YDLHIHFSTISGKYRRIGSDAPGHLKNIFEDFKLKMKNWPGNTYEEKCKQKAYLEYVLNS
HHHEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKKAKLKSYDINSSNYDVDNDITNQTTIKQNPFDLYIANNNKLEGYSWSMKLFLRGIFQK
HHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
SWAGTYSNEDFDGLISSIQLDNLEKLLSPAIIIEPFNITAILINHNKLNIRELKKTLKEF
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHH
TLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFY
HCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALELTLASVKDKCQKDRENIINRLLEKYSNSQEQNNLTINNHQSQTIDGHREDDDIETNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
NEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKEIELDLNNDITHQFENQSQTT
CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCHHH
DKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEI
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHCCHHHHHCCCCCCC
NTHSDGQELTANMSNSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIES
CCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
YQENNIENLQIIRETHTEEVMQSVKKRKSCYDEHEDLYTRKRQCNNPALNSDHGTEVALN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
EQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAGYSASILE
CCCCCCEEEEECCHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MDKFVYDLELDNLEKLLQPARLIESPSITSMICNNCRVNLDVLTDTLKALTSNIDILKNL
CCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHH
YDLHIHFSTISGKYRRIGSDAPGHLKNIFEDFKLKMKNWPGNTYEEKCKQKAYLEYVLNS
HHHEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LKKAKLKSYDINSSNYDVDNDITNQTTIKQNPFDLYIANNNKLEGYSWSMKLFLRGIFQK
HHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
SWAGTYSNEDFDGLISSIQLDNLEKLLSPAIIIEPFNITAILINHNKLNIRELKKTLKEF
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCHHHHHHHHHHH
TLNINTLEVLYTLNIPFSTFFSKLHHIGSKAPDFLYKIFKILDIMIKVHKNAEERLISFY
HCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ALELTLASVKDKCQKDRENIINRLLEKYSNSQEQNNLTINNHQSQTIDGHREDDDIETNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
NEINTHSDSQELAANISNSELTTNEILNRALAIDDNDIKEIELDLNNDITHQFENQSQTT
CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCHHH
DKYLENDREDILYQSMKAIDGTTSSSSNSICITSYQIMPSVEEVAQQPMQDDIQNSSDEI
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHCCHHHHHCCCCCCC
NTHSDGQELTANMSNSELTTDEIFNRMLDIDDDDNIKEIVLKLNNYIANQSENQSQPIES
CCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
YQENNIENLQIIRETHTEEVMQSVKKRKSCYDEHEDLYTRKRQCNNPALNSDHGTEVALN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
EQDSINVDCYTFGTISHLAGESICILSSDTERFIITGTAGYSASILE
CCCCCCEEEEECCHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA