| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183049
Identifier: 189183049
GI number: 189183049
Start: 136665
End: 136982
Strand: Reverse
Name: 189183049
Synonym: OTT_0142
Alternate gene names: NA
Gene position: 136982-136665 (Counterclockwise)
Preceding gene: 189183050
Following gene: 189183048
Centisome position: 6.82
GC content: 33.96
Gene sequence:
>318_bases ATGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCT AGCTGCAGCTAATATAATTGCGATAATGGCTGCAATTACCAAAGAAGAAAAGTGGTTGTTAATTCCAGCAATGGAGCCTG ATCGTAAAATGATGGTTTCATCAAAAAATTACCATGAAACCTATTTAAAGGAATGGGCAATTTATGTGATGAAAGTCTTA TTTACTACTTCTCCAAATGAGGTAGAAAGGCAAATAGCAGACATGAAGCTGGAGCTAGCAATGCTTTTGATAAGCTAG
Upstream 100 bases:
>100_bases TATCGGAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCCAGCTCCATTAGGATATTCAAGACTGCTG GGCAAAAAAGTTGGCAAATA
Downstream 100 bases:
>100_bases CTGATTTTGCTATAAAACGAGCTGATTCTATGAGCCCAGTCGTTCTTATTGCGTCAGGTAGAGTCATCGATGTTGTATTT AAAAAAGGTTTTGACTTACG
Product: putative conjugative transfer protein TraE
Products: NA
Alternate protein names: Conjugative Transfer Protein
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMMVSSKNYHETYLKEWAIYVMKVL FTTSPNEVERQIADMKLELAMLLIS
Sequences:
>Translated_105_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMMVSSKNYHETYLKEWAIYVMKVL FTTSPNEVERQIADMKLELAMLLIS >Mature_105_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMMVSSKNYHETYLKEWAIYVMKVL FTTSPNEVERQIADMKLELAMLLIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12145; Mature: 12145
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMMVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHC SKNYHETYLKEWAIYVMKVLFTTSPNEVERQIADMKLELAMLLIS CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMMVS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHC SKNYHETYLKEWAIYVMKVLFTTSPNEVERQIADMKLELAMLLIS CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA