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The map label for this gene is traC [H]

Identifier: 189183046

GI number: 189183046

Start: 134167

End: 136215

Strand: Reverse

Name: traC [H]

Synonym: OTT_0139

Alternate gene names: 189183046

Gene position: 136215-134167 (Counterclockwise)

Preceding gene: 189183047

Following gene: 189183045

Centisome position: 6.78

GC content: 35.87

Gene sequence:

>2049_bases
ATGTTGTTAACAAGTCGCCGAAAAAACCAAAAAAATATCTTATTAATTTATTTAAATCAAAACAGAGTCAAGGTGAACGC
AAGCATACATAAGGATTTTGATCGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGACTCAGCTAT
TCTTTAATCGTGGTTCAATAGGCTTTGTATTGCTTGCATGCCCATTGGCTGAAGCTAGTGTTTCGGCTCAAAATGAAATT
GCTGAATTTCTGAAAAGCGATGAAAATTTACCTGCTGAAAGTAGCCTTCAAGTATTGATGATTGGTAGTAATAATATAGA
GAATTTTTTAAGCAACTGGCAGTCATATTGTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGAGTTTTTGC
GTGATCAAGCTCAAAAAGTAGGTTCTATAAAGGATGTAGTATTGTTAATTTCAGTTACTATACCTAATTTAAATGCAAAT
ATAGATGATATGATTCGCAGACGAGATGCTTTAAAAGATACGTTTAGGTCCATGAAAGCTAAGCAATCTGCATCGGCCTT
TTGTTCGATGTTAAGACGAAGTGGATGGTATTTTGTACCATGTAAATATGATCATGTAGCCGTGTTACTAGCTGCCCTAC
CAATGCAATTAGTTGAACAAGGCCCAAAAGGTGTATTGTGTCAAAATAAAACATCAGGAGTTGGAGTAGCACTTTCTAAC
TTAGGTCGAGGCATAAAAACTGTTTCTGTAGAGAGTAAAGTATTATTACCAATCATTGGTGAATGGAAAGGTGATTTAAG
CTCTCCAGGTATGTTACTAGCTGGCAGACGAGGACAAATAATGTATTGGTCACCTTTTGGTGGAGCTTTATTACCTACAT
TAAATAAGCACGGAACAGCTCCAAATGAGAACTTTAACCTTTGTATAGCTGGAGTTCCAGGGTCTAGAAAATCTGTTTTT
ATGCAAGAATTAATGCTATCAGTTCTAGGAGTTGGTGGTAAGGTTTTTGTTCTTGATTACGGAAGATCATTTAAGCGTAC
ATGCTTGATTCTAGGCGGCAGCTACATAGAATTTGATATGAAAAATCCTGTATCGATTAATCCATTTTCCGAAGTACCAG
AGAATGACAGTGCAAAGTCTATAGAGGCTAGATCGGATTTTTTATCTAACTTTCCATCTATTTTAGCCACCATGGCTGCT
CCACAGTATGGAACAAGCGATTTACAACAACCAATGATACAGAGAGCTTTGATATCAGTCTGGCAAAAAAAGGGAGCTAA
AGCTGAAATTACCGATATTGCAGACTGGTTATCAAATAGAGAAGAATCATATGCTAAAGAGCTTGGAAATATGCTCTTTC
CTTTTACTAAAGATGGTCAACATGGGAGATTTTTTAGCGGTAAGGCGCAATTATCTCTAAACTCTGATATTGTGGTAATT
GAAACTGATGATCTACGCTCTGTACCAGAGCTGTTAGCTGTGATTGTACAGATTATGATTGTTCATATTAATCAAACAAT
GGTTAAGGGAGATAGAAGTAGACCATTTTTAATTATGATCGATGAAGCCTGGAAACTCTTAGCTGGAAAGCGTTCAGGAG
AGTTTATTGAAGAAGCTGGAAGAATAGCTCGAAAATATAATGGATCGATTGCTTTAGCTACTCAGCAACTCACGGATTAC
TTTCGTCAAGAGGGTTCCGCATCTGAAAAAGCATTTGAGAATTCATCACATAAGATAATCTTAAAGCAAAATTCAGAATC
ATTTAAGGCAATGAGAGCTAACCCTAAGCTTGCAGGCTTTGTGGATGAGGATTGGAAGCTGAATTTACTGCAATCTGTAC
ATTCAAATCCTCCGTATTATAGTGAAATAGCTATTTACAGCCCTAATGTTTCAGGTGTTATAGGCAGATTAATGATTGAT
CCGTTTACTCTGCTGTTAACTTCGACGAATGCTAGAGATTATCAAGCAATAGAAGACCATATGGCTAAAGGTATGAATGT
TAGTGAAGCAATTAAGAGCATTTTAATAGACAGAAAAGTTATTTTATAA

Upstream 100 bases:

>100_bases
TTTGATATTGATAATCTTGAGAAAGTTGAAACATCAAAAACTAAATCAAAAAGACGTTGTATTCTATGCTACAGGCAAGC
TAAAGCAGTTCAAGGCGTAG

Downstream 100 bases:

>100_bases
ACTTTTTTAAAAAGTGAGAAAGATCTAAGGCAATATTTGACAAAATCCTTAAATTTATGCAAACTAAATTTATATACATT
AATATTATTATTCATTTAGT

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MLLTSRRKNQKNILLIYLNQNRVKVNASIHKDFDRERFSKHFVYESYDDETQLFFNRGSIGFVLLACPLAEASVSAQNEI
AEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYCKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNAN
IDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGVLCQNKTSGVGVALSN
LGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGTAPNENFNLCIAGVPGSRKSVF
MQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPSILATMAA
PQYGTSDLQQPMIQRALISVWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVI
ETDDLRSVPELLAVIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDY
FRQEGSASEKAFENSSHKIILKQNSESFKAMRANPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVIGRLMID
PFTLLLTSTNARDYQAIEDHMAKGMNVSEAIKSILIDRKVIL

Sequences:

>Translated_682_residues
MLLTSRRKNQKNILLIYLNQNRVKVNASIHKDFDRERFSKHFVYESYDDETQLFFNRGSIGFVLLACPLAEASVSAQNEI
AEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYCKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNAN
IDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGVLCQNKTSGVGVALSN
LGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGTAPNENFNLCIAGVPGSRKSVF
MQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPSILATMAA
PQYGTSDLQQPMIQRALISVWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVI
ETDDLRSVPELLAVIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDY
FRQEGSASEKAFENSSHKIILKQNSESFKAMRANPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVIGRLMID
PFTLLLTSTNARDYQAIEDHMAKGMNVSEAIKSILIDRKVIL
>Mature_682_residues
MLLTSRRKNQKNILLIYLNQNRVKVNASIHKDFDRERFSKHFVYESYDDETQLFFNRGSIGFVLLACPLAEASVSAQNEI
AEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYCKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNAN
IDDMIRRRDALKDTFRSMKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGVLCQNKTSGVGVALSN
LGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGTAPNENFNLCIAGVPGSRKSVF
MQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPENDSAKSIEARSDFLSNFPSILATMAA
PQYGTSDLQQPMIQRALISVWQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVI
ETDDLRSVPELLAVIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAGRIARKYNGSIALATQQLTDY
FRQEGSASEKAFENSSHKIILKQNSESFKAMRANPKLAGFVDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVIGRLMID
PFTLLLTSTNARDYQAIEDHMAKGMNVSEAIKSILIDRKVIL

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 76098; Mature: 76098

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTSRRKNQKNILLIYLNQNRVKVNASIHKDFDRERFSKHFVYESYDDETQLFFNRGSI
CCCCCCCCCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
GFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYCKGE
EEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCE
IFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKA
EEEEEHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGVLCQNKTSGVGVALSN
HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH
LGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGTA
CCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
PNENFNLCIAGVPGSRKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDM
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEEC
KNPVSINPFSEVPENDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPMIQRALISV
CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVI
HHHCCCCCHHHHHHHHHHCHHHHHHHHHCCEECCCCCCCCCCCEECCEEEEEECCCEEEE
ETDDLRSVPELLAVIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAG
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHH
RIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRANPKLAGF
HHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCHHHHHHCCCCEEEE
VDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVIGRLMIDPFTLLLTSTNARDYQAIEDH
CCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
MAKGMNVSEAIKSILIDRKVIL
HHCCCCHHHHHHHHHHCCHHCC
>Mature Secondary Structure
MLLTSRRKNQKNILLIYLNQNRVKVNASIHKDFDRERFSKHFVYESYDDETQLFFNRGSI
CCCCCCCCCCCCEEEEEEECCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
GFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSNNIENFLSNWQSYCKGE
EEEEEECCHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCE
IFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSMKA
EEEEEHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
KQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGVLCQNKTSGVGVALSN
HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHH
LGRGIKTVSVESKVLLPIIGEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPTLNKHGTA
CCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCC
PNENFNLCIAGVPGSRKSVFMQELMLSVLGVGGKVFVLDYGRSFKRTCLILGGSYIEFDM
CCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCEEEEEC
KNPVSINPFSEVPENDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPMIQRALISV
CCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WQKKGAKAEITDIADWLSNREESYAKELGNMLFPFTKDGQHGRFFSGKAQLSLNSDIVVI
HHHCCCCCHHHHHHHHHHCHHHHHHHHHCCEECCCCCCCCCCCEECCEEEEEECCCEEEE
ETDDLRSVPELLAVIVQIMIVHINQTMVKGDRSRPFLIMIDEAWKLLAGKRSGEFIEEAG
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCHHHHHHH
RIARKYNGSIALATQQLTDYFRQEGSASEKAFENSSHKIILKQNSESFKAMRANPKLAGF
HHHHHCCCCEEEEHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCHHHHHHCCCCEEEE
VDEDWKLNLLQSVHSNPPYYSEIAIYSPNVSGVIGRLMIDPFTLLLTSTNARDYQAIEDH
CCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
MAKGMNVSEAIKSILIDRKVIL
HHCCCCHHHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]