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The map label for this gene is traU [H]

Identifier: 189183043

GI number: 189183043

Start: 131027

End: 131971

Strand: Reverse

Name: traU [H]

Synonym: OTT_0136

Alternate gene names: 189183043

Gene position: 131971-131027 (Counterclockwise)

Preceding gene: 189183044

Following gene: 189183042

Centisome position: 6.57

GC content: 38.1

Gene sequence:

>945_bases
ATGTATATAACAGCTAATAACTGTCATGCAGCTGCTGGCTGTGTTGGAAGATTTGTAAATCCTATAACAGATGTATGTTG
GAAGTGCTTGTTTCCAATTACTATAGCTGGATTTAAGGTAGTAAGCAGTTCAATGCCTGATACTAATGGTTCTGGTAGAC
TTATATGTCTTTGTCCTAAGCCAGGGATTCCAATACCTGTACCTGGTATTCCAGTAGGATTTTGGGAGCCAGTACGACTT
GTAGATGTTACAAAATCACCAATGTGTATGGTAAGTCTTGGAGGTTTGTCATTTGGAAGCGCTACTCAAAAAGGCATGAA
AGATGAAGCTGAAGGAAGTGCTTTTTATCACATTCATTTGTATGTCTATCACGTGATTTATTGGTTAGAGATTTTGCTTG
ATTTTATTTGTCTGGAAATGGCTGCAGTAGATATAGCATATTTAACAGAGTTTGATCCATTATGGAGTGACGATGCAAAA
TCTGCGATTTTAAATCCAGAAACGTTGTTGTTTCAAAATGTAGCTGCTTATCAAGCATGTATAGCTGATTGCATGAGTTG
TAGCGCTGGTTTATTAGCAAGCGATTATGCTTTTTGGTGTGCCGAATGTCAAGGAATGCTTTACCCTTTTACTGGAACAG
CTGCAGCGCATAATGGTGGAGTTGGAACATCTGTATTAATGGTAAGTAAATTTATGGCTAGAATGCATAGGCAACTGATG
TTATGGGGATATTATGGTTATAAAGGCCTATGTGGTAAGTATCCTATGCCTATCATGAAGAAAAGCCAGTATCGACTACA
AATGACTTATCCGATTCCAGAAACTAAATCCTGTAAGAGCATAGGTCAAACAGAAGCTATATGGCAAGCTGGTAGAGAAT
TTCCAGTTAATGGTGAAGATTTCGGTTACTTGATTTGGCGAAAAAGAGATTGCTGTTTGCAATGA

Upstream 100 bases:

>100_bases
GTGCCAGCCATAATAGAACAACAAAATAACGTGCTTAAAATTAGCGAAGTAAGCACCCTATGAAAAGCATATAACGCACG
ATTGAGGTACAGCGATAGTA

Downstream 100 bases:

>100_bases
AAAAATATACAAGTTAGCATGTGATAGCAAAATGGCCGTAAGACGAATGAGAAATGCTGTTGCTGATAGGCTTGGCGTAT
CTATAGAGCATATTGGTACA

Product: putative conjugative transfer protein TraU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MYITANNCHAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNGSGRLICLCPKPGIPIPVPGIPVGFWEPVRL
VDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGSAFYHIHLYVYHVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAK
SAILNPETLLFQNVAAYQACIADCMSCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVSKFMARMHRQLM
LWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIWRKRDCCLQ

Sequences:

>Translated_314_residues
MYITANNCHAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNGSGRLICLCPKPGIPIPVPGIPVGFWEPVRL
VDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGSAFYHIHLYVYHVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAK
SAILNPETLLFQNVAAYQACIADCMSCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVSKFMARMHRQLM
LWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIWRKRDCCLQ
>Mature_314_residues
MYITANNCHAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNGSGRLICLCPKPGIPIPVPGIPVGFWEPVRL
VDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGSAFYHIHLYVYHVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAK
SAILNPETLLFQNVAAYQACIADCMSCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVSKFMARMHRQLM
LWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGEDFGYLIWRKRDCCLQ

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 34755; Mature: 34755

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYITANNCHAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNGSGRLICLCPK
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PGIPIPVPGIPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGSAFYHIHL
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEEEEHHH
YVYHVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAKSAILNPETLLFQNVAAYQAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
IADCMSCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVSKFMARMHRQLM
HHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
LWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGED
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHCCCCCCCCCCC
FGYLIWRKRDCCLQ
CEEEEEECCCCCCC
>Mature Secondary Structure
MYITANNCHAAAGCVGRFVNPITDVCWKCLFPITIAGFKVVSSSMPDTNGSGRLICLCPK
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
PGIPIPVPGIPVGFWEPVRLVDVTKSPMCMVSLGGLSFGSATQKGMKDEAEGSAFYHIHL
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEEEEHHH
YVYHVIYWLEILLDFICLEMAAVDIAYLTEFDPLWSDDAKSAILNPETLLFQNVAAYQAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH
IADCMSCSAGLLASDYAFWCAECQGMLYPFTGTAAAHNGGVGTSVLMVSKFMARMHRQLM
HHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHE
LWGYYGYKGLCGKYPMPIMKKSQYRLQMTYPIPETKSCKSIGQTEAIWQAGREFPVNGED
EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHCCCCCCCCCCC
FGYLIWRKRDCCLQ
CEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]