Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183024

Identifier: 189183024

GI number: 189183024

Start: 113309

End: 114379

Strand: Reverse

Name: 189183024

Synonym: OTT_0117

Alternate gene names: NA

Gene position: 114379-113309 (Counterclockwise)

Preceding gene: 189183025

Following gene: 189183023

Centisome position: 5.69

GC content: 31.65

Gene sequence:

>1071_bases
TTGAGCTTGCAGCAATCAGGCATTAAAGGTAATATCATTGCTAGTGCAGGAATTTCGAATTTGACAAATTATTCACCATT
TCCTGGTGAAAAAATCATCATTGCAGCAGATAATGATAGCAAAAATCCTATAACTAATAATACTGTAATTAAAGCTGCAA
AAACGTTAGAAATGAAGGGAGCGATAACTTGTATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGCTGCAAACT
TGTGGAGACCAGTCAATTAGAGACATTATAGAACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACCAAACTTAC
TCAAACAGAAAATAATAGTATAGCAAAACAAAATGATATTACTAATGTTAAAGAATTGTATAATAAATCGTCATCTCTAT
ACTACTTTAAACAAGAAGAGGAAGCTAAGGTGGAAACGATAGTAGTAAACAAATTTTTAGAAAACCATACAGGAATTTAT
AGTGCAAAAATCTTTAACAATTCTAATTTAAGGGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACT
CACTATTTTTGTTAAAAATGAAGCAGGTGAAATTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAG
CTGATATTCCAGAAAAATCTGTTGGTACAATTAGTGGATCATTTGCTGAAATTGCTCAACAAAATCCAAAATACTCACCT
GTAATAATCATTACAAAGGATATTGAAACAGCGTTAACCATTCAGCAAGCTAGAGTCGAAGGCAAAATCTTATGTGCAAT
TGAAGCCGAAAATTTGCAAAACTATAATCCTGGCCCAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTG
AAAAAGCTGAAAAAGTTCTAGAGGATAAGGAAGCAGTAGTCTGCACAGTCAAAAATGACTTCAATAATGTATTGAAAACT
CAAGGATTATATGCTGTTAGAAATATTATCAGCCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAA
TATACAACCAGGATTATGTCCGAAACACTAG

Upstream 100 bases:

>100_bases
TAAAACAATAGGTAAAATCAGCGAATCATTTATAATAATAGCAAAACGAAATGCAAATGACCCTAATATAACAGTTATAG
CAGAAGGCGCCGAAACAGCA

Downstream 100 bases:

>100_bases
GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAAAAATTAAAGCATGATTCATT
GGCAAAGACAATCATGAGTG

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSLQQSGIKGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQT
CGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIY
SAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSP
VIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKT
QGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH

Sequences:

>Translated_356_residues
MSLQQSGIKGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQT
CGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIY
SAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSP
VIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKT
QGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
>Mature_355_residues
SLQQSGIKGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQTC
GDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYS
AKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSPV
IIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQ
GLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39288; Mature: 39157

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQQSGIKGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKG
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECC
AITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDI
EEEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCC
TNVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEET
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC
QKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSP
CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
VIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVL
EEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
EDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
CCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLQQSGIKGNIIASAGISNLTNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKG
CCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECC
AITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDI
EEEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCC
TNVKELYNKSSSLYYFKQEEEAKVETIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEET
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCC
QKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTISGSFAEIAQQNPKYSP
CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
VIIITKDIETALTIQQARVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVL
EEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
EDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
CCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA