| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182927
Identifier: 189182927
GI number: 189182927
Start: 23882
End: 24373
Strand: Direct
Name: 189182927
Synonym: OTT_0020
Alternate gene names: NA
Gene position: 23882-24373 (Clockwise)
Preceding gene: 189182926
Following gene: 189182928
Centisome position: 1.19
GC content: 30.49
Gene sequence:
>492_bases GTGAAACAGATATTGCTAATGAGACATGGTGATGCTAAGCATAATATTAATGATTTTGCTAGACCGCTTAGTGAATTAGG AAGGCAAGTAGTAACAAACGCATCTTATTTTCTAAATAAATTTAATATTGAAAAAGTATTGTGTTCTCCTAGCGCTCGTA CACTTGAAACATTAAATATTGTAAAAACAGTGAGTTCAATTAGCATTAATGACAATAATATTGATATAATAGACAAGATG TATCAAAGTAATGTAGAAAATATTATCGATATCATTCAACAGCAACCGGATGATATACAATCATTACTTATTATAGGCCA TAATCCATACTTATATGAGTTTTATAGGTTAACAGTAGCACAACAGAAAAGAAATAACTTTAAGCTAGTTCCAGCTTGTG TGATAGTTATACAATATGCAGATGTGAATTCTTGGGCTAGCTCGTTGTTAGGATTAGGGGCTGTATATGATATCTTTATG CCTAATTATTAA
Upstream 100 bases:
>100_bases TTCTTTTATAGATTTGTTAAATAGTAACTTAGAATGAAAGTTATTCATATTTTAGAGTAAAGATGATTGAAGTGTTTTTT AAAATATAAATGGTGAATAA
Downstream 100 bases:
>100_bases TATCTTAGTATTGTGAACATTAATCAACTAATAGCTTCTGATCCGTATGTATCATGTTGGGTGTCTGCCTCTGCAGGTAC AGGAAAAACTAAAGTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKQILLMRHGDAKHNINDFARPLSELGRQVVTNASYFLNKFNIEKVLCSPSARTLETLNIVKTVSSISINDNNIDIIDKM YQSNVENIIDIIQQQPDDIQSLLIIGHNPYLYEFYRLTVAQQKRNNFKLVPACVIVIQYADVNSWASSLLGLGAVYDIFM PNY
Sequences:
>Translated_163_residues MKQILLMRHGDAKHNINDFARPLSELGRQVVTNASYFLNKFNIEKVLCSPSARTLETLNIVKTVSSISINDNNIDIIDKM YQSNVENIIDIIQQQPDDIQSLLIIGHNPYLYEFYRLTVAQQKRNNFKLVPACVIVIQYADVNSWASSLLGLGAVYDIFM PNY >Mature_163_residues MKQILLMRHGDAKHNINDFARPLSELGRQVVTNASYFLNKFNIEKVLCSPSARTLETLNIVKTVSSISINDNNIDIIDKM YQSNVENIIDIIQQQPDDIQSLLIIGHNPYLYEFYRLTVAQQKRNNFKLVPACVIVIQYADVNSWASSLLGLGAVYDIFM PNY
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18610; Mature: 18610
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQILLMRHGDAKHNINDFARPLSELGRQVVTNASYFLNKFNIEKVLCSPSARTLETLNI CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHH VKTVSSISINDNNIDIIDKMYQSNVENIIDIIQQQPDDIQSLLIIGHNPYLYEFYRLTVA HHHHHHEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCCHHHHHHHHHHH QQKRNNFKLVPACVIVIQYADVNSWASSLLGLGAVYDIFMPNY HHHCCCCEEEEEHEEEEEECCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQILLMRHGDAKHNINDFARPLSELGRQVVTNASYFLNKFNIEKVLCSPSARTLETLNI CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHH VKTVSSISINDNNIDIIDKMYQSNVENIIDIIQQQPDDIQSLLIIGHNPYLYEFYRLTVA HHHHHHEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCCHHHHHHHHHHH QQKRNNFKLVPACVIVIQYADVNSWASSLLGLGAVYDIFMPNY HHHCCCCEEEEEHEEEEEECCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA