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The map label for this gene is olmA

Identifier: 189182922

GI number: 189182922

Start: 20254

End: 20619

Strand: Reverse

Name: olmA

Synonym: OTT_0015

Alternate gene names: NA

Gene position: 20619-20254 (Counterclockwise)

Preceding gene: 189182924

Following gene: 189182914

Centisome position: 1.03

GC content: 27.05

Gene sequence:

>366_bases
ATGCAATATAATATGGTTTACTTTAGAGTTTTTATTAAGAGAATATTTTTATTATTGAGTCTATTATTAATATTAAGTGC
TAGTACTATTGACTATCATGGTAAGTACATTCGAGATGAGCAGATAGAACAGTTACAAGAAAAATTACTACGCCAAGATA
TTAGTTTATCTAAGCTTGATGTTATTAATTTAATAGGCGCTCCTTCTTTTATCTCAGCAGACAATTTAAATATCTGGTAT
TACATCCATTATACCACCAAAGTAAATAATCTTTGGTTTAATAAATTGCTGGCTCAAAGAATTGTTATACTCACTTTTAA
TGCTGATAATGACAGATTAATGCGTATATTAGTTTTTGATAACTAA

Upstream 100 bases:

>100_bases
CCATATATGTCCTCGATAAAATTTTATAATTTGTAATTTTTATATATTAAATTAGAACTTAATATATTATATTTTATCAA
TGAAATCCAGCTAATTAATA

Downstream 100 bases:

>100_bases
TCTTGCTATAATAAAATATACATAGAGAAGTATGACAATGAATCAAGAAATTAAAGAGTTCAAAATCAATGCAGCTACAT
TATATTTATATTTAGAAAAT

Product: hypothetical protein homologous to outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQYNMVYFRVFIKRIFLLLSLLLILSASTIDYHGKYIRDEQIEQLQEKLLRQDISLSKLDVINLIGAPSFISADNLNIWY
YIHYTTKVNNLWFNKLLAQRIVILTFNADNDRLMRILVFDN

Sequences:

>Translated_121_residues
MQYNMVYFRVFIKRIFLLLSLLLILSASTIDYHGKYIRDEQIEQLQEKLLRQDISLSKLDVINLIGAPSFISADNLNIWY
YIHYTTKVNNLWFNKLLAQRIVILTFNADNDRLMRILVFDN
>Mature_121_residues
MQYNMVYFRVFIKRIFLLLSLLLILSASTIDYHGKYIRDEQIEQLQEKLLRQDISLSKLDVINLIGAPSFISADNLNIWY
YIHYTTKVNNLWFNKLLAQRIVILTFNADNDRLMRILVFDN

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14447; Mature: 14447

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNMVYFRVFIKRIFLLLSLLLILSASTIDYHGKYIRDEQIEQLQEKLLRQDISLSKLD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
VINLIGAPSFISADNLNIWYYIHYTTKVNNLWFNKLLAQRIVILTFNADNDRLMRILVFD
HHHHCCCCCEECCCCCEEEEEEEEEEEECHHHHHHHHHCEEEEEEEECCCCEEEEEEEEC
N
C
>Mature Secondary Structure
MQYNMVYFRVFIKRIFLLLSLLLILSASTIDYHGKYIRDEQIEQLQEKLLRQDISLSKLD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH
VINLIGAPSFISADNLNIWYYIHYTTKVNNLWFNKLLAQRIVILTFNADNDRLMRILVFD
HHHHCCCCCEECCCCCEEEEEEEEEEEECHHHHHHHHHCEEEEEEEECCCCEEEEEEEEC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA