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The map label for this gene is yrbG [C]

Identifier: 189026257

GI number: 189026257

Start: 1128867

End: 1129892

Strand: Direct

Name: yrbG [C]

Synonym: TPASS_1034

Alternate gene names: 189026257

Gene position: 1128867-1129892 (Clockwise)

Preceding gene: 189026254

Following gene: 189026259

Centisome position: 99.07

GC content: 62.67

Gene sequence:

>1026_bases
ATGGAATCGTTTGTACGCAGCGCACTTGCGGCGCGCACACTCCCCACCTTACTCGGCGTCTTGCTCTGTGCGCTCTACTT
TCTGGCCCGCAGCGCAGACTGCTTGGTAGAGAGCGCCAGCGCGCTTTCCCGGCGTTGGGGGATCAGCGAAGCGCTCCTGG
GCGCCACGCTCGTGAGCCTGGGCACCACCACCCCCGAGGCAGCCGTGTCTGTATACGCTGCGCTCTGCGGCAACGCCGAC
TTAGCACTCGGAAACGCCATAGGATCCATCGTGGTGGATACCGGTTTCATTCTCGGACTCGGGGCACTCCTTGCACGCCC
CGGGCTCGCGCTCGACACACACTTGATGCGCCGGCACGCGCGGGTGCAATTGTTCGTCGTATGCGCGCTCGGATGGGTAA
CCCTGCCACGCTTTGGCGCGCGGGTGCATCAGTACGTCGGCTGGCTGTTTCTCAGTCTGCTCGCGCTGTACCTGTGGGTT
TCTCTGCGCTGGTCGGCCCTCCCACACGCTCCAGACACCCGCACAGCAGCGCTCCCCGCAGACAAGACTGATACGCGCAG
TGTATGCCGCCTGCTCCTGCAATTAGGAGGGGGAATCGGGTTCCTCGTCCTCGGTTCGCGCGTCCTCATCCCCACGGTAG
AAATCATGGCGCTCCGCGCAGGAGTACCTGCAGGCATCATAGCCGCAACCATCATCGCCTTTGGCACCAGCGTGCCAGAA
CTCGTCTCTGCCATCACCGCAGTACGCCGCGGACACGGCGCACTGGCAGTGGGAAACATAGTAGGTGCGGATATCCTCAA
TGTGCTGTTTGTAGTCGGAGCTGCCGCGTCTCTTACGCCACACGGCCTGCCGGTGCCAAAAATCTTTTCTCTGCTACACC
TGCCTGCCATGCTGTTAGTCGTGGGAATCTTTCACGCGTGCGCACTCGGCCGCAGGACCCTCACCCGCCCTGCCGGTGTG
CTCCTGTGCGCGGTATATGGGCTGTTCGTGCTGCTAAACGGATTGCTCAGGGGCACAGGACCCTAA

Upstream 100 bases:

>100_bases
ACCTGAAAGAACGAGCGACCACTTCACGTGCGGTCATTATGAGCGTTTTCCTCCCTGCTGTCCATTCTCCCCCCAGTGTG
ATACCGTTCCAGTACGCAGT

Downstream 100 bases:

>100_bases
TCGGAGTCAGAGAGCGGTCCAGGCTTTCCATTCATGTCCGCAAGATATCCTGCAAGGGTGTGGCACGTTGCGCGCGCCTC
TGCCAGTTTCTTGCGCTCTG

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MESFVRSALAARTLPTLLGVLLCALYFLARSADCLVESASALSRRWGISEALLGATLVSLGTTTPEAAVSVYAALCGNAD
LALGNAIGSIVVDTGFILGLGALLARPGLALDTHLMRRHARVQLFVVCALGWVTLPRFGARVHQYVGWLFLSLLALYLWV
SLRWSALPHAPDTRTAALPADKTDTRSVCRLLLQLGGGIGFLVLGSRVLIPTVEIMALRAGVPAGIIAATIIAFGTSVPE
LVSAITAVRRGHGALAVGNIVGADILNVLFVVGAAASLTPHGLPVPKIFSLLHLPAMLLVVGIFHACALGRRTLTRPAGV
LLCAVYGLFVLLNGLLRGTGP

Sequences:

>Translated_341_residues
MESFVRSALAARTLPTLLGVLLCALYFLARSADCLVESASALSRRWGISEALLGATLVSLGTTTPEAAVSVYAALCGNAD
LALGNAIGSIVVDTGFILGLGALLARPGLALDTHLMRRHARVQLFVVCALGWVTLPRFGARVHQYVGWLFLSLLALYLWV
SLRWSALPHAPDTRTAALPADKTDTRSVCRLLLQLGGGIGFLVLGSRVLIPTVEIMALRAGVPAGIIAATIIAFGTSVPE
LVSAITAVRRGHGALAVGNIVGADILNVLFVVGAAASLTPHGLPVPKIFSLLHLPAMLLVVGIFHACALGRRTLTRPAGV
LLCAVYGLFVLLNGLLRGTGP
>Mature_341_residues
MESFVRSALAARTLPTLLGVLLCALYFLARSADCLVESASALSRRWGISEALLGATLVSLGTTTPEAAVSVYAALCGNAD
LALGNAIGSIVVDTGFILGLGALLARPGLALDTHLMRRHARVQLFVVCALGWVTLPRFGARVHQYVGWLFLSLLALYLWV
SLRWSALPHAPDTRTAALPADKTDTRSVCRLLLQLGGGIGFLVLGSRVLIPTVEIMALRAGVPAGIIAATIIAFGTSVPE
LVSAITAVRRGHGALAVGNIVGADILNVLFVVGAAASLTPHGLPVPKIFSLLHLPAMLLVVGIFHACALGRRTLTRPAGV
LLCAVYGLFVLLNGLLRGTGP

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

Organism=Escherichia coli, GI1789587, Length=295, Percent_Identity=34.5762711864407, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 35538; Mature: 35538

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFVRSALAARTLPTLLGVLLCALYFLARSADCLVESASALSRRWGISEALLGATLVSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GTTTPEAAVSVYAALCGNADLALGNAIGSIVVDTGFILGLGALLARPGLALDTHLMRRHA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RVQLFVVCALGWVTLPRFGARVHQYVGWLFLSLLALYLWVSLRWSALPHAPDTRTAALPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKTDTRSVCRLLLQLGGGIGFLVLGSRVLIPTVEIMALRAGVPAGIIAATIIAFGTSVPE
CCCCHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
LVSAITAVRRGHGALAVGNIVGADILNVLFVVGAAASLTPHGLPVPKIFSLLHLPAMLLV
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VGIFHACALGRRTLTRPAGVLLCAVYGLFVLLNGLLRGTGP
HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESFVRSALAARTLPTLLGVLLCALYFLARSADCLVESASALSRRWGISEALLGATLVSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GTTTPEAAVSVYAALCGNADLALGNAIGSIVVDTGFILGLGALLARPGLALDTHLMRRHA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RVQLFVVCALGWVTLPRFGARVHQYVGWLFLSLLALYLWVSLRWSALPHAPDTRTAALPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DKTDTRSVCRLLLQLGGGIGFLVLGSRVLIPTVEIMALRAGVPAGIIAATIIAFGTSVPE
CCCCHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
LVSAITAVRRGHGALAVGNIVGADILNVLFVVGAAASLTPHGLPVPKIFSLLHLPAMLLV
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VGIFHACALGRRTLTRPAGVLLCAVYGLFVLLNGLLRGTGP
HHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]