Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026218

Identifier: 189026218

GI number: 189026218

Start: 1080946

End: 1082232

Strand: Direct

Name: 189026218

Synonym: TPASS_0995

Alternate gene names: NA

Gene position: 1080946-1082232 (Clockwise)

Preceding gene: 189026217

Following gene: 189026222

Centisome position: 94.87

GC content: 46.08

Gene sequence:

>1287_bases
ATGAGTATGAGCAAAATACCTCTTATCAGTACGGTTACGTCTACCATATCTGCCATTAACGGTGCGTGTACTGGAGAACG
CGTGGATATACACATTCAGACGCTCTCTCGTCTGAATGAGATAGCATCCGTTTTTCGCTTCGAGATGCCTGAGATTAAGA
TTATTGATTTTGGTGACCCAAACGTCGACAGCGAAGCGTGTTTAAAAATTATAAAGGATGATCCTTGGCTTCTATTTGGT
GGGGTGATTGCTATCACTAACTCGATGGAAGAAAAAATAAAAATCGTAAATCGCAAAGACCCGAATTTCCTTTCAGTTTC
CACGCGGCAGGAATTTGAAGCGCATGCCTCCCAGGTTGTGCGAATCGTGGACAGAAACCGACACTTTCTTTCTAGTCGCA
GCCTCGTGCACCAAGCACATGGACACGAGCAGGGAAATTTTATCTGCGACACCGATTCCTTTGAGATTACCTTTTACACC
AGCTTGATTAGTTCGTACCTGTACAATACCAACCGTATCAATGAGCTTGAACGCACTTCGTTTGAAGGCGCAATGATGGA
ACTGTTACTCAATGCACTGGAGCACGGAAACTGCGGCATTAGCTACGACGAAAAAACAGAGTGGCTCGAACAGCGCAAGG
ATATCTTTGATTTGATTGCTCTGCGCAAGCAGGACCCGCGCATTAGCGCGAAAAAAATCTATATTTCCTATGACATTACA
CTGCAGCGTACACGCATTACCATTCGTGACGAAGGCACAGGCTTTGATTGGAAAAGCCGCATGGCAAGCGCGTGCAAACC
TGGTCTACACGGTATGGGCATAAAAATGACAGAAATTTTTGTCAAAAGGCTCAGCTATAACGACGTGGGCAACGAGGTGA
CGTTTGAAATTGACAACCAGGAAAACGTCGCGAACCTTGTGCCTTCAATTTTGAAAAACCAACAGGTACTAACGTTCCGG
GATGCCCAGGTGGTATGTTACCAGAACGAAGAATCCAGTTCCCTTTTCTACATTTCGTCGGGGAAATTCGCAGTGTACGT
GGATAACAAGTTCATGTCCATGCTGACCCCATCAGACATATTCATCGGGGAAATGTCGTTCTTGCTCAACAACCGGCGCT
CTGCAACGATTGTATCAGTAGGCGAAGGCACACTGGTAAAGATATCAAAGATGAAGTTCATCTCACTGATTGAGGATCAT
CCTCACTATGGGATCTACCTCGCACGCCTGCTTGCAGGTAGACTTGCCCATCAATCGCGCGAGAGCGCAAGCTTAAAAAC
ACCCTGA

Upstream 100 bases:

>100_bases
GCATGCCCCCACACGATATACCTAATGCGTAGCCAGATCTCATTCTCGAATGATAAGTCAACCGATGATTACCGTGGCTC
GATTTCTATAACAAAGGATT

Downstream 100 bases:

>100_bases
CCCTTCTCGGTCAACGAACACCCGACACCGGCGCACAAGCTATCCCCTCATGACAGGACACCAACCGATTCAGGAGAAAC
TATCAATAGCCGTCAGATAC

Product: cyclic nucleotide binding protein

Products: NA

Alternate protein names: Response Regulator With ATPase Domain; Response Regulator Receiver Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSMSKIPLISTVTSTISAINGACTGERVDIHIQTLSRLNEIASVFRFEMPEIKIIDFGDPNVDSEACLKIIKDDPWLLFG
GVIAITNSMEEKIKIVNRKDPNFLSVSTRQEFEAHASQVVRIVDRNRHFLSSRSLVHQAHGHEQGNFICDTDSFEITFYT
SLISSYLYNTNRINELERTSFEGAMMELLLNALEHGNCGISYDEKTEWLEQRKDIFDLIALRKQDPRISAKKIYISYDIT
LQRTRITIRDEGTGFDWKSRMASACKPGLHGMGIKMTEIFVKRLSYNDVGNEVTFEIDNQENVANLVPSILKNQQVLTFR
DAQVVCYQNEESSSLFYISSGKFAVYVDNKFMSMLTPSDIFIGEMSFLLNNRRSATIVSVGEGTLVKISKMKFISLIEDH
PHYGIYLARLLAGRLAHQSRESASLKTP

Sequences:

>Translated_428_residues
MSMSKIPLISTVTSTISAINGACTGERVDIHIQTLSRLNEIASVFRFEMPEIKIIDFGDPNVDSEACLKIIKDDPWLLFG
GVIAITNSMEEKIKIVNRKDPNFLSVSTRQEFEAHASQVVRIVDRNRHFLSSRSLVHQAHGHEQGNFICDTDSFEITFYT
SLISSYLYNTNRINELERTSFEGAMMELLLNALEHGNCGISYDEKTEWLEQRKDIFDLIALRKQDPRISAKKIYISYDIT
LQRTRITIRDEGTGFDWKSRMASACKPGLHGMGIKMTEIFVKRLSYNDVGNEVTFEIDNQENVANLVPSILKNQQVLTFR
DAQVVCYQNEESSSLFYISSGKFAVYVDNKFMSMLTPSDIFIGEMSFLLNNRRSATIVSVGEGTLVKISKMKFISLIEDH
PHYGIYLARLLAGRLAHQSRESASLKTP
>Mature_427_residues
SMSKIPLISTVTSTISAINGACTGERVDIHIQTLSRLNEIASVFRFEMPEIKIIDFGDPNVDSEACLKIIKDDPWLLFGG
VIAITNSMEEKIKIVNRKDPNFLSVSTRQEFEAHASQVVRIVDRNRHFLSSRSLVHQAHGHEQGNFICDTDSFEITFYTS
LISSYLYNTNRINELERTSFEGAMMELLLNALEHGNCGISYDEKTEWLEQRKDIFDLIALRKQDPRISAKKIYISYDITL
QRTRITIRDEGTGFDWKSRMASACKPGLHGMGIKMTEIFVKRLSYNDVGNEVTFEIDNQENVANLVPSILKNQQVLTFRD
AQVVCYQNEESSSLFYISSGKFAVYVDNKFMSMLTPSDIFIGEMSFLLNNRRSATIVSVGEGTLVKISKMKFISLIEDHP
HYGIYLARLLAGRLAHQSRESASLKTP

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48574; Mature: 48443

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSKIPLISTVTSTISAINGACTGERVDIHIQTLSRLNEIASVFRFEMPEIKIIDFGDP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NVDSEACLKIIKDDPWLLFGGVIAITNSMEEKIKIVNRKDPNFLSVSTRQEFEAHASQVV
CCCHHHHHHHHCCCCEEEECCHHEECCCHHHHHEEECCCCCCEEEECHHHHHHHHHHHHH
RIVDRNRHFLSSRSLVHQAHGHEQGNFICDTDSFEITFYTSLISSYLYNTNRINELERTS
HHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEHHHHHHHHHCCCCCCCHHHHHH
FEGAMMELLLNALEHGNCGISYDEKTEWLEQRKDIFDLIALRKQDPRISAKKIYISYDIT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEE
LQRTRITIRDEGTGFDWKSRMASACKPGLHGMGIKMTEIFVKRLSYNDVGNEVTFEIDNQ
EEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
ENVANLVPSILKNQQVLTFRDAQVVCYQNEESSSLFYISSGKFAVYVDNKFMSMLTPSDI
CCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCEEEEEECCCEEEEECCCHHHHCCCCHH
FIGEMSFLLNNRRSATIVSVGEGTLVKISKMKFISLIEDHPHYGIYLARLLAGRLAHQSR
HHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
ESASLKTP
CCCCCCCC
>Mature Secondary Structure 
SMSKIPLISTVTSTISAINGACTGERVDIHIQTLSRLNEIASVFRFEMPEIKIIDFGDP
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NVDSEACLKIIKDDPWLLFGGVIAITNSMEEKIKIVNRKDPNFLSVSTRQEFEAHASQVV
CCCHHHHHHHHCCCCEEEECCHHEECCCHHHHHEEECCCCCCEEEECHHHHHHHHHHHHH
RIVDRNRHFLSSRSLVHQAHGHEQGNFICDTDSFEITFYTSLISSYLYNTNRINELERTS
HHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEHHHHHHHHHCCCCCCCHHHHHH
FEGAMMELLLNALEHGNCGISYDEKTEWLEQRKDIFDLIALRKQDPRISAKKIYISYDIT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEE
LQRTRITIRDEGTGFDWKSRMASACKPGLHGMGIKMTEIFVKRLSYNDVGNEVTFEIDNQ
EEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC
ENVANLVPSILKNQQVLTFRDAQVVCYQNEESSSLFYISSGKFAVYVDNKFMSMLTPSDI
CCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCEEEEEECCCEEEEECCCHHHHCCCCHH
FIGEMSFLLNNRRSATIVSVGEGTLVKISKMKFISLIEDHPHYGIYLARLLAGRLAHQSR
HHHHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
ESASLKTP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA