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The map label for this gene is ybgI [C]

Identifier: 189026200

GI number: 189026200

Start: 1062066

End: 1062926

Strand: Direct

Name: ybgI [C]

Synonym: TPASS_0977

Alternate gene names: 189026200

Gene position: 1062066-1062926 (Clockwise)

Preceding gene: 189026199

Following gene: 189026201

Centisome position: 93.21

GC content: 56.91

Gene sequence:

>861_bases
ATGACCGCACGTGAGTTAGATGCGTACTTTCGTAGTTTTTTGAACTTTGGACCGTTCGTCTCCTGTGATGTCGCTCTCAA
CGGCCTGCAGGTAGCAAATAGCGGTGCCCCCGTGCACAAGGTTGCCTTTGCAGTGGATGCGTGTGCACAGTCTATCGACG
CAGCCGCCCGCGCCGGTGCACGCATGCTCTTTGTCCATCACGGTCTTTTTTGGGGACGCATAGAGCCGCTTACCGGTATG
CAATACCGACGCGTACAGGCGCTCCTGACGCACGACATAGCGCTGTACGCAGTGCACCTACCACTCGATGCACACCCGCA
GTACGGTAACAATGCGGGCCTTGCTGCGCGAGTCGGTCTTAGGCAAGGTGGTCCTTTCGGTTTTATCCGTGGAACTGCCG
TAGGACTCTGGGGGACGGTGGCAGAAAACACCACCCCCTCTCAGGAGGCAATGCAGCAGCATGCAGCGTGCACAGCACCC
GATACCCACCGCGTGACGCATGCGAATGCAATATCGCCGAGTGCCGGGCTATCTCTCCAACAAGTAGTACATCGCCTCTT
CCCCGCAGAAGAGCAACCCGTGCGCCTGTTACCGTTTGGGAAACAGCGTATCGAGCGCGTGGGTATACTGTCGGGCAAAG
CAGGCACGTACCTTGCGGAGGCTATCGCGTTAGATCTGGACCTGTTTATTACCGGGGAGATTGAACATTCTTGCTATCAC
ACCGCGCGCGAGCACTCTATCTCGGTAATCGCAGGGGGACACTACCAAACAGAAACCGTAGGGTTGCAGCTGGTGGCGCG
CAAGCTGCAACGGGATACAGGCATAGAAACGCTTTTTCTAGACATTCCCACGGGGATGTGA

Upstream 100 bases:

>100_bases
CAGGTAGACCAGTGGATACGCGCCCAGCTGCATCTATCAGAACCTGTCCTTCCGCACGCGCAAGCGCTATCTCATCACAC
TGTCCATGCGGGAGGGACCT

Downstream 100 bases:

>100_bases
TACGCTCGCGCCCGTTAAGGGTGGATACAATGAAACTCACACGGATACAGAAAGAAAAGTGGATCCCGCTTTTTGCCGCT
GGATTAGTTGTTGTTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTARELDAYFRSFLNFGPFVSCDVALNGLQVANSGAPVHKVAFAVDACAQSIDAAARAGARMLFVHHGLFWGRIEPLTGM
QYRRVQALLTHDIALYAVHLPLDAHPQYGNNAGLAARVGLRQGGPFGFIRGTAVGLWGTVAENTTPSQEAMQQHAACTAP
DTHRVTHANAISPSAGLSLQQVVHRLFPAEEQPVRLLPFGKQRIERVGILSGKAGTYLAEAIALDLDLFITGEIEHSCYH
TAREHSISVIAGGHYQTETVGLQLVARKLQRDTGIETLFLDIPTGM

Sequences:

>Translated_286_residues
MTARELDAYFRSFLNFGPFVSCDVALNGLQVANSGAPVHKVAFAVDACAQSIDAAARAGARMLFVHHGLFWGRIEPLTGM
QYRRVQALLTHDIALYAVHLPLDAHPQYGNNAGLAARVGLRQGGPFGFIRGTAVGLWGTVAENTTPSQEAMQQHAACTAP
DTHRVTHANAISPSAGLSLQQVVHRLFPAEEQPVRLLPFGKQRIERVGILSGKAGTYLAEAIALDLDLFITGEIEHSCYH
TAREHSISVIAGGHYQTETVGLQLVARKLQRDTGIETLFLDIPTGM
>Mature_285_residues
TARELDAYFRSFLNFGPFVSCDVALNGLQVANSGAPVHKVAFAVDACAQSIDAAARAGARMLFVHHGLFWGRIEPLTGMQ
YRRVQALLTHDIALYAVHLPLDAHPQYGNNAGLAARVGLRQGGPFGFIRGTAVGLWGTVAENTTPSQEAMQQHAACTAPD
THRVTHANAISPSAGLSLQQVVHRLFPAEEQPVRLLPFGKQRIERVGILSGKAGTYLAEAIALDLDLFITGEIEHSCYHT
AREHSISVIAGGHYQTETVGLQLVARKLQRDTGIETLFLDIPTGM

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=285, Percent_Identity=31.2280701754386, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y977_TREPA (O83942)

Other databases:

- EMBL:   AE000520
- PIR:   G71257
- RefSeq:   NP_219414.1
- ProteinModelPortal:   O83942
- SMR:   O83942
- GeneID:   2611756
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0977
- NMPDR:   fig|243276.1.peg.972
- TIGR:   TP_0977
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- ProtClustDB:   CLSK218953
- BioCyc:   TPAL243276:TP_0977-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 30883; Mature: 30751

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARELDAYFRSFLNFGPFVSCDVALNGLQVANSGAPVHKVAFAVDACAQSIDAAARAGA
CCHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
RMLFVHHGLFWGRIEPLTGMQYRRVQALLTHDIALYAVHLPLDAHPQYGNNAGLAARVGL
EEEEEECCEEEECCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEECC
RQGGPFGFIRGTAVGLWGTVAENTTPSQEAMQQHAACTAPDTHRVTHANAISPSAGLSLQ
CCCCCCEEEECCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHH
QVVHRLFPAEEQPVRLLPFGKQRIERVGILSGKAGTYLAEAIALDLDLFITGEIEHSCYH
HHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH
TAREHSISVIAGGHYQTETVGLQLVARKLQRDTGIETLFLDIPTGM
HHHHCCEEEEECCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
TARELDAYFRSFLNFGPFVSCDVALNGLQVANSGAPVHKVAFAVDACAQSIDAAARAGA
CHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
RMLFVHHGLFWGRIEPLTGMQYRRVQALLTHDIALYAVHLPLDAHPQYGNNAGLAARVGL
EEEEEECCEEEECCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCEEEEECC
RQGGPFGFIRGTAVGLWGTVAENTTPSQEAMQQHAACTAPDTHRVTHANAISPSAGLSLQ
CCCCCCEEEECCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHH
QVVHRLFPAEEQPVRLLPFGKQRIERVGILSGKAGTYLAEAIALDLDLFITGEIEHSCYH
HHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHH
TAREHSISVIAGGHYQTETVGLQLVARKLQRDTGIETLFLDIPTGM
HHHHCCEEEEECCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876