| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026139
Identifier: 189026139
GI number: 189026139
Start: 995343
End: 995471
Strand: Direct
Name: 189026139
Synonym: TPASS_0916
Alternate gene names: NA
Gene position: 995343-995471 (Clockwise)
Preceding gene: 189026138
Following gene: 189026140
Centisome position: 87.35
GC content: 55.81
Gene sequence:
>129_bases GTGGCGCCAGGCCTTTGGGAGCAGGAGCAGTCACTTTCGTGCGGGACGTGCACCTATGGAAGAACAGAGGTGAACTCACG TATACTCCGGAAGCTCCGCGTGGGAATTGGCTATGAACGAGAACTTTGA
Upstream 100 bases:
>100_bases ACGATAAAAACAGGCTCACTCGAATTTTGAACTCCATCGATTGATCTGCCTGAACGAACGCGTCTCTCGCTCCCTCTCTG CTTTTGTGCGTTTTGCCTAG
Downstream 100 bases:
>100_bases AAAAATCCAGACGCTTCTCGAGCACAAGCGTTACGTACCACTTATTGCAAATCTAAACGAGATGAACGAGGTGGACGTCG CGCATGTCTTGGACATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MAPGLWEQEQSLSCGTCTYGRTEVNSRILRKLRVGIGYEREL
Sequences:
>Translated_42_residues MAPGLWEQEQSLSCGTCTYGRTEVNSRILRKLRVGIGYEREL >Mature_41_residues APGLWEQEQSLSCGTCTYGRTEVNSRILRKLRVGIGYEREL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y916_TREPA (O83886)
Other databases:
- EMBL: AE000520 - PIR: A71265 - RefSeq: NP_219351.1 - ProteinModelPortal: O83886 - IntAct: O83886 - GeneID: 2611307 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0916 - NMPDR: fig|243276.1.peg.910 - TIGR: TP_0916 - HOGENOM: HBG732162 - ProtClustDB: CLSK2300332 - BioCyc: TPAL243276:TP_0916-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4802; Mature: 4670
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGLWEQEQSLSCGTCTYGRTEVNSRILRKLRVGIGYEREL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure APGLWEQEQSLSCGTCTYGRTEVNSRILRKLRVGIGYEREL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876