| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is yeaZ [C]
Identifier: 189026099
GI number: 189026099
Start: 954435
End: 955100
Strand: Direct
Name: yeaZ [C]
Synonym: TPASS_0876
Alternate gene names: 189026099
Gene position: 954435-955100 (Clockwise)
Preceding gene: 189026098
Following gene: 189026100
Centisome position: 83.76
GC content: 52.4
Gene sequence:
>666_bases ATGAATATACTTGCCATCAACACCGTTGCGCATGCCCTCAACGTTGCAGCTGAAGGAGCACAAGGCACCGCTGTTGTGAG CATCGAAGGTGCGCATTGTTGCATACAGCAACAGCTCGTGCGTGCGCTTGACGTTGTCGTAAAACGCGCAGGATTTCCTG TACAGGAAACACAAATCGTTGCCTGTCCTCGGGGGCCTGGTTCATTTACCGGCTTGCGTACCGGTTTTGCAGTTGCAAAA GCCCTACAGCTGGGTGTCGGAGCCCGTTTTATTGCCGTGCCTACGCTGCGCCTTGCGGCACATCCGTTCCGCGCGTTCAC AGGACGGGTGTTGTCCATACTAGATGCAAAACGTGGTCGTTTTTTTTGGAACTGCTTTAAGTCAGGAGAGCCGCTCTTTG AAGACTCTCACAACCACGCACAAGAAATCGTAAAAAAAGTGGACACACGGGTTCCATGCCTGGTGTGCGGCACGGGAACA GCACTTTTTAAAAGTGTAATGGAAAGCCAGGACAACACGGTTCCTTTCATGTACGTAGAAACTGACGCTCATGAAGGAGC AAAGACACTCCTTGCTTTGGTAAAAGTGCTCAATCACAGCGCCGCCACTCCGGGGGAGCGCGGAGCGCCGCAGTACACAA CACGAACTTACGCAAAAGGAAGCTAA
Upstream 100 bases:
>100_bases ACCATCTCGTTGCGTGTGCTCGCAGATGGTAACCGAGAGATTACCGTAGCGTAGCGCAGAGTGCTTCCTGTCTTGCAAAA AGGCAAAGAGGGCGGGGTGT
Downstream 100 bases:
>100_bases TACTATGGGCAATTCAGATATCTGTTCTGACATTAATGATATCGAAGAACTTCAATCTGAAGAAGGTGATGCACCTATAC GAGAAAATGCCAATCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoprotease Family Protein
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRAGFPVQETQIVACPRGPGSFTGLRTGFAVAK ALQLGVGARFIAVPTLRLAAHPFRAFTGRVLSILDAKRGRFFWNCFKSGEPLFEDSHNHAQEIVKKVDTRVPCLVCGTGT ALFKSVMESQDNTVPFMYVETDAHEGAKTLLALVKVLNHSAATPGERGAPQYTTRTYAKGS
Sequences:
>Translated_221_residues MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRAGFPVQETQIVACPRGPGSFTGLRTGFAVAK ALQLGVGARFIAVPTLRLAAHPFRAFTGRVLSILDAKRGRFFWNCFKSGEPLFEDSHNHAQEIVKKVDTRVPCLVCGTGT ALFKSVMESQDNTVPFMYVETDAHEGAKTLLALVKVLNHSAATPGERGAPQYTTRTYAKGS >Mature_221_residues MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRAGFPVQETQIVACPRGPGSFTGLRTGFAVAK ALQLGVGARFIAVPTLRLAAHPFRAFTGRVLSILDAKRGRFFWNCFKSGEPLFEDSHNHAQEIVKKVDTRVPCLVCGTGT ALFKSVMESQDNTVPFMYVETDAHEGAKTLLALVKVLNHSAATPGERGAPQYTTRTYAKGS
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788109, Length=135, Percent_Identity=34.0740740740741, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23648; Mature: 23648
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRAGFPVQETQIV CCEEEHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE ACPRGPGSFTGLRTGFAVAKALQLGVGARFIAVPTLRLAAHPFRAFTGRVLSILDAKRGR EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCC FFWNCFKSGEPLFEDSHNHAQEIVKKVDTRVPCLVCGTGTALFKSVMESQDNTVPFMYVE EEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEE TDAHEGAKTLLALVKVLNHSAATPGERGAPQYTTRTYAKGS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNILAINTVAHALNVAAEGAQGTAVVSIEGAHCCIQQQLVRALDVVVKRAGFPVQETQIV CCEEEHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE ACPRGPGSFTGLRTGFAVAKALQLGVGARFIAVPTLRLAAHPFRAFTGRVLSILDAKRGR EECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHCCCCC FFWNCFKSGEPLFEDSHNHAQEIVKKVDTRVPCLVCGTGTALFKSVMESQDNTVPFMYVE EEEEHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEE TDAHEGAKTLLALVKVLNHSAATPGERGAPQYTTRTYAKGS CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA