| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is yjeE [C]
Identifier: 189026098
GI number: 189026098
Start: 953981
End: 954388
Strand: Direct
Name: yjeE [C]
Synonym: TPASS_0875
Alternate gene names: 189026098
Gene position: 953981-954388 (Clockwise)
Preceding gene: 189026097
Following gene: 189026099
Centisome position: 83.72
GC content: 56.86
Gene sequence:
>408_bases GTGAGGTGCGTCAGTCGCTCAGCGCAGGATACTGCGCGGTGGGGCACGGTAGTCGGAAGGCTGCTTGAGGAAGGTTCCGT AGTAGTCTTGCAGGGGGCGTTAGCGGCAGGGAAAACCTGTTTTGTAAAGGGGCTCGCTCTGGGACTCGGTATCCAAGAGG AGATTACGAGTCCTACCTTCACACTGCTGGCAGTCTACCACGGCAGGCTGACGCTCTATCATATGGACGTGTACCGGCTC GCTTCCCTGGAAGACTTCTTTGATATCGGTGCGCAGGAGTGCGTATACGGCACGGGAGTCTGTGTCATTGAATGGGGAGA ACGGGTCGCGTCAGAACTGCCGGAGTACACTGTTACCATCTCGTTGCGTGTGCTCGCAGATGGTAACCGAGAGATTACCG TAGCGTAG
Upstream 100 bases:
>100_bases TGTACAAGCACTCAAGCGTGTAGTGAGACTGTTGATCGAGAAGAATCAGTTGCCGCGTTAGATCTTGTCCAGTTTTTTTA AAAACGGTAGACTCGCCGCG
Downstream 100 bases:
>100_bases CGCAGAGTGCTTCCTGTCTTGCAAAAAGGCAAAGAGGGCGGGGTGTATGAATATACTTGCCATCAACACCGTTGCGCATG CCCTCAACGTTGCAGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA
Sequences:
>Translated_135_residues MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA >Mature_135_residues MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family
Homologues:
Organism=Escherichia coli, GI1790610, Length=128, Percent_Identity=35.15625, Blast_Score=76, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y875_TREPA (O83845)
Other databases:
- EMBL: AE000520 - PIR: A71271 - RefSeq: NP_219310.1 - ProteinModelPortal: O83845 - SMR: O83845 - IntAct: O83845 - GeneID: 2611127 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0875 - NMPDR: fig|243276.1.peg.869 - TIGR: TP_0875 - HOGENOM: HBG734187 - OMA: EYSSENQ - ProtClustDB: CLSK218901 - BioCyc: TPAL243276:TP_0875-MONOMER - InterPro: IPR003442 - TIGRFAMs: TIGR00150
Pfam domain/function: PF02367 UPF0079
EC number: NA
Molecular weight: Translated: 14672; Mature: 14672
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTF CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCHH TLLAVYHGRLTLYHMDVYRLASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTI EEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCHHEECCCEEEEECHHHHHHHCCCEEEEE SLRVLADGNREITVA EEEEEECCCEEEEEC >Mature Secondary Structure MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTF CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCHH TLLAVYHGRLTLYHMDVYRLASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTI EEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCHHEECCCEEEEECHHHHHHHCCCEEEEE SLRVLADGNREITVA EEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876