Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is yjeE [C]

Identifier: 189026098

GI number: 189026098

Start: 953981

End: 954388

Strand: Direct

Name: yjeE [C]

Synonym: TPASS_0875

Alternate gene names: 189026098

Gene position: 953981-954388 (Clockwise)

Preceding gene: 189026097

Following gene: 189026099

Centisome position: 83.72

GC content: 56.86

Gene sequence:

>408_bases
GTGAGGTGCGTCAGTCGCTCAGCGCAGGATACTGCGCGGTGGGGCACGGTAGTCGGAAGGCTGCTTGAGGAAGGTTCCGT
AGTAGTCTTGCAGGGGGCGTTAGCGGCAGGGAAAACCTGTTTTGTAAAGGGGCTCGCTCTGGGACTCGGTATCCAAGAGG
AGATTACGAGTCCTACCTTCACACTGCTGGCAGTCTACCACGGCAGGCTGACGCTCTATCATATGGACGTGTACCGGCTC
GCTTCCCTGGAAGACTTCTTTGATATCGGTGCGCAGGAGTGCGTATACGGCACGGGAGTCTGTGTCATTGAATGGGGAGA
ACGGGTCGCGTCAGAACTGCCGGAGTACACTGTTACCATCTCGTTGCGTGTGCTCGCAGATGGTAACCGAGAGATTACCG
TAGCGTAG

Upstream 100 bases:

>100_bases
TGTACAAGCACTCAAGCGTGTAGTGAGACTGTTGATCGAGAAGAATCAGTTGCCGCGTTAGATCTTGTCCAGTTTTTTTA
AAAACGGTAGACTCGCCGCG

Downstream 100 bases:

>100_bases
CGCAGAGTGCTTCCTGTCTTGCAAAAAGGCAAAGAGGGCGGGGTGTATGAATATACTTGCCATCAACACCGTTGCGCATG
CCCTCAACGTTGCAGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL
ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA

Sequences:

>Translated_135_residues
MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL
ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA
>Mature_135_residues
MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTFTLLAVYHGRLTLYHMDVYRL
ASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTISLRVLADGNREITVA

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family

Homologues:

Organism=Escherichia coli, GI1790610, Length=128, Percent_Identity=35.15625, Blast_Score=76, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y875_TREPA (O83845)

Other databases:

- EMBL:   AE000520
- PIR:   A71271
- RefSeq:   NP_219310.1
- ProteinModelPortal:   O83845
- SMR:   O83845
- IntAct:   O83845
- GeneID:   2611127
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0875
- NMPDR:   fig|243276.1.peg.869
- TIGR:   TP_0875
- HOGENOM:   HBG734187
- OMA:   EYSSENQ
- ProtClustDB:   CLSK218901
- BioCyc:   TPAL243276:TP_0875-MONOMER
- InterPro:   IPR003442
- TIGRFAMs:   TIGR00150

Pfam domain/function: PF02367 UPF0079

EC number: NA

Molecular weight: Translated: 14672; Mature: 14672

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTF
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCHH
TLLAVYHGRLTLYHMDVYRLASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTI
EEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCHHEECCCEEEEECHHHHHHHCCCEEEEE
SLRVLADGNREITVA
EEEEEECCCEEEEEC
>Mature Secondary Structure
MRCVSRSAQDTARWGTVVGRLLEEGSVVVLQGALAAGKTCFVKGLALGLGIQEEITSPTF
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHCCCHH
TLLAVYHGRLTLYHMDVYRLASLEDFFDIGAQECVYGTGVCVIEWGERVASELPEYTVTI
EEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCHHEECCCEEEEECHHHHHHHCCCEEEEE
SLRVLADGNREITVA
EEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876