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The map label for this gene is rpmF

Identifier: 189026032

GI number: 189026032

Start: 878831

End: 879019

Strand: Direct

Name: rpmF

Synonym: TPASS_0807

Alternate gene names: 189026032

Gene position: 878831-879019 (Clockwise)

Preceding gene: 189026029

Following gene: 189026033

Centisome position: 77.13

GC content: 55.03

Gene sequence:

>189_bases
ATGGCAGTGCCCCGAGCAAATACCTCAAAAGCACGCACCCGTAGAAGGCGTGCGGTTAATATGCGGCTTGAGGCCCCGCA
TCTTGTTGAGTGTGGGAACTGTGGTAATTTTGTGCAGTCTCACCGTGTGTGTGGTAGGTGTGGCTTCTACCGGGGGCGCC
AGGTGATTAACCCTGATGACCTTTGCTAG

Upstream 100 bases:

>100_bases
ACCCTTGACCGTTCACCGAAGAACATGCACAATGGCGAGCCTGTGTGTTGCGGTCGACGGTCCGAAGCGCACAGTTCTTG
CGCAGAAAGGAGCGCACCCT

Downstream 100 bases:

>100_bases
TGCCCGTGCGAGTGTGCACCTGAGCGACTGCCTTTTGCTCGCGCACAAGGAGGCTGCCCCGTGGATGAGTTGTTCTTAAG
AATGAGGGCATTAGTGGCAG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MAVPRANTSKARTRRRRAVNMRLEAPHLVECGNCGNFVQSHRVCGRCGFYRGRQVINPDDLC

Sequences:

>Translated_62_residues
MAVPRANTSKARTRRRRAVNMRLEAPHLVECGNCGNFVQSHRVCGRCGFYRGRQVINPDDLC
>Mature_61_residues
AVPRANTSKARTRRRRAVNMRLEAPHLVECGNCGNFVQSHRVCGRCGFYRGRQVINPDDLC

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_TREPA (O83785)

Other databases:

- EMBL:   AE000520
- PIR:   E71277
- RefSeq:   NP_219244.1
- ProteinModelPortal:   O83785
- SMR:   O83785
- IntAct:   O83785
- GeneID:   2610866
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0807
- NMPDR:   fig|243276.1.peg.803
- TIGR:   TP_0807
- HOGENOM:   HBG728381
- OMA:   NCGERII
- ProtClustDB:   PRK12286
- BioCyc:   TPAL243276:TP_0807-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7045; Mature: 6914

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPRANTSKARTRRRRAVNMRLEAPHLVECGNCGNFVQSHRVCGRCGFYRGRQVINPDD
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
LC
CC
>Mature Secondary Structure 
AVPRANTSKARTRRRRAVNMRLEAPHLVECGNCGNFVQSHRVCGRCGFYRGRQVINPDD
CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
LC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876