| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026028
Identifier: 189026028
GI number: 189026028
Start: 872630
End: 873838
Strand: Direct
Name: 189026028
Synonym: TPASS_0803
Alternate gene names: NA
Gene position: 872630-873838 (Clockwise)
Preceding gene: 189026027
Following gene: 189026029
Centisome position: 76.58
GC content: 49.38
Gene sequence:
>1209_bases ATGGGCGCGCTAGCGTGTGACTACACCTATTCTCCGTCGCCAAAACGAGATCTCTCCATTGCAGCGAAAAATGCCGTCGT CCGAAATATTCTGCAGGAGATTGCGATACACGGCTCCTTTCTTTTGCTCGGACATGAACATCCTGATGAAGACTGTATCG CATCGTTAGTAGCCTTCGCACTCCTGCTCACGCGATGCAATAAACGCGTGGAAATTTGTTGTCAAGGTCCCATTCGTGTG CAGATTTCATTCCTCATTGATATTTGTCTCTATAACGGAATTGCCGTGCATCTCGATACACAAACTGTCCCCCGTATGCC GGATGCCCTGGTCATTCTAGACACCCCAAATCCCGGTATGATCTACGCGCCTCCGTCGTGCCGACTACTCCTTTCAGATT CGACTATCCGTAAAATTGAACTTGACCATCACCTTTTTGCAAACGCTGCCTGCTGCGGTGATCCAGGCTACAGCCTTATC GCACGCGCCTCTAGCACGTGCGAAATCATCGCTTATCTTTGTTACAAACTCGCGCGTAACCACGCGCAGCGCACTGCGCT TGGGATACGCAATTTGTATTCACGCAATGTTGTGCTTTCAATACTCACCGGTATGATAGGGGATGCAAAGACAGGTGCTT ATTTGATAAGTCGGAAAGACCGCGCGCTCTACACCTACTTCACCCAGAGGCTGAACACTATGCTCAGGGAAAAAACAAAA CCGATTACCGGGAACATAGCATCCACCAAACAAATCCTCCATACCCTGGAGTCTCTGTCCGCTGAAGAACATGCGGTTTA CCAAACAATGGTGAAAAACGTGCAACACCGCGGCAGTATTTCCCTGCTCCTTCTCAATCAGACACAAACACAGGCGTTGC ACGAGTGTTGCAATGCAGAACATTTCGTTTCGTTGATAAAAATGGCGACCAGCAACATTGCAGAGAGTATCTCAGGTATC GGTATCTCCGCGTATCCAGATCCAACACAGCAATTTTATGTCACGCAGTGGCGCGTGCGCACTGCCGCGCGGGTGAAACA GTTGGATTTGCGTTTACTGCTATCTCATTTTGCTATTCAAAACGGCGGTGGACACGCCGGTGCCATCGGCTTCCGTTTCT TTGCACACGAATTGATAAATCAAGATTTGTTTACCGAAGCGCTTGTCGCATATCTAGACGACCGCTTGCACCACATGCAG AGCGCGTAA
Upstream 100 bases:
>100_bases TTCACACGAGTAACAAGGGAGCAACATTACCCAGAAAATAATTGGGAGAACGGTCTCATTTGCCGCACACCAGCGGACAC TCTATAGTATACTCGCCGTC
Downstream 100 bases:
>100_bases CATGACAACACCACCTCCCGTTTGCGTAAGGAAAGTAGTGTGTTGCGCACCCGTGTTTCAAAAGGAATGTAAACGCTATG GCAAAGGTTGAACTCAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRV QISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLI ARASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGI GISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQ SA
Sequences:
>Translated_402_residues MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRV QISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLI ARASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGI GISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQ SA >Mature_401_residues GALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRVQ ISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIA RASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTKP ITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGIG ISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQS A
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44578; Mature: 44447
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFA CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LLLTRCNKRVEICCQGPIRVQISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGM HHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCE IYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIARASSTCEIIAYLCYKLARN EECCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH HAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAE CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHH HFVSLIKMATSNIAESISGIGISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC NGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFA CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH LLLTRCNKRVEICCQGPIRVQISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGM HHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCE IYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIARASSTCEIIAYLCYKLARN EECCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH HAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAE CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHH HFVSLIKMATSNIAESISGIGISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC NGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA