| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025925
Identifier: 189025925
GI number: 189025925
Start: 767884
End: 768276
Strand: Reverse
Name: 189025925
Synonym: TPASS_0700
Alternate gene names: NA
Gene position: 768276-767884 (Counterclockwise)
Preceding gene: 189025926
Following gene: 189025924
Centisome position: 67.42
GC content: 57.0
Gene sequence:
>393_bases ATGGTGATGGCCGCGGCGCCTTTACAGAATTTGTGTTACGACGGACTTTTACAGGTAACCTCAGGGGGCAATATCTCGCT CCCTGTACCCTCGAATCAGGTGATATACGCTCATTTCGAACATGTTGATGCGACTCCTGCGGAGCAGGGGCAGGCAGGGG TGTCGGTGTCTGAGCTGCAGATTTTGGACGCGTTGGTCGAGCGGCTGATAGTGCAGCGTCGGGTAGCGGCAGAAGCGGCA GACATGGCGGTGCAGAAGCGGCAGGAGACACTGCTCCGCGCCGCAGAGCTTTTTTCTCAGAAGCAAGTGGACGAGACCAA ACGGCGGGGAGAGTCTCTTCCTTACACCTCAGTAGAAGTACAGGGGCCTGAGCTTTTTGACTTGCGCGCGTAG
Upstream 100 bases:
>100_bases AGATTAGGAGTTTGTTTTCTAGAAGTTGTTTTTCAATAAAGGGCCGGTTCTAAGTCACGCTCTCCCTTCTGCCGATAGAG GGGGCGGAGGTGGGGATGCT
Downstream 100 bases:
>100_bases GGCACGTGCAGGCAGAAGTACTTGACTTTTTTGAGGATAGGGGGGAGACTCCGCCTGGCCGGAGTTCTGAGGCTGGGTAT GGACTCTTTTGGAGAGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA
Sequences:
>Translated_130_residues MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA >Mature_130_residues MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y700_TREPA (O83698)
Other databases:
- EMBL: AE000520 - PIR: A71294 - RefSeq: NP_219137.1 - ProteinModelPortal: O83698 - IntAct: O83698 - MINT: MINT-6480415 - GeneID: 2611595 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0700 - NMPDR: fig|243276.1.peg.696 - TIGR: TP_0700 - HOGENOM: HBG251042 - OMA: MIQTENI - ProtClustDB: CLSK218823 - BioCyc: TPAL243276:TP_0700-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14204; Mature: 14204
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQ CCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH ILDALVERLIVQRRVAAEAADMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE QGPELFDLRA CCCCEECCCC >Mature Secondary Structure MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQ CCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH ILDALVERLIVQRRVAAEAADMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE QGPELFDLRA CCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876