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The map label for this gene is 189025899

Identifier: 189025899

GI number: 189025899

Start: 741293

End: 741901

Strand: Direct

Name: 189025899

Synonym: TPASS_0674

Alternate gene names: NA

Gene position: 741293-741901 (Clockwise)

Preceding gene: 189025889

Following gene: 189025900

Centisome position: 65.06

GC content: 63.38

Gene sequence:

>609_bases
ATGCGCCCGCTCATGGCGGGGAAAAGACGTAAGGATATTCTGCCTCTTGAGGAGGCTCTGAGGGCGCAGAGCGCGTTTGC
CCGGACGTTGCGTACGTGGGAAGGAGCCCGAAGGGCGGCCGTGCGAAGTGCGACTGTGCGCGCACGGCGCCGTGGCGCGC
TTCCGTCCTCGCAGGCTGCCGCTGCGCCGCGTGTTTCCCTGATGGAAGTGGCGCTTGCGCGCTACGGACTTTTCGACAAG
GACGCTGCAGGCGCTTGTGCGGAGTATGCGCGGCAGAGGCGTACCTTCTCCATCCATTCCCGACGGGGAAGGAGGAAGCT
GCGCACCGCAGTCCCTGAGGCGCGTTTAGACCTCCATGGCATGACGTGCAGTGAGGCGCGCAGTGCACTTGATTCGTTTT
TTGCGCAGGCGCGTGAGCGGCTCCTCCAGAAGGTTGAAATCGTCCACGGAAAGGGCCACCATTCCAAGGGTGGGAGTGTC
CTTGCTCCCTCGGTCAAGCGCTACGTGCAGGCCCATCCTCACGCGGGTGAACTCTTTCACCCTGCAGAACGGCGCGGGGG
TAAGGGCACCACGTGGGTCCTTCTGAAAAGGAGCGTTCCTCTGCATTAG

Upstream 100 bases:

>100_bases
CACTCCTCATGCACCGTGACCGCCTCCCTGTCTTCCCCTTCCTACCACGCAGGATGCCGCTTCACGCGGTTGATTGCACA
GACAGGTTTTTTATGAAAGA

Downstream 100 bases:

>100_bases
GCCCGATGAATACCACCGGGCGTCCTGTATTTCCACTGCTCAGGAGGACCGTTTTGAAGCGCTGCTCCCTGTGTGCCACA
CGCTGTGCGATCGTGTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRPLMAGKRRKDILPLEEALRAQSAFARTLRTWEGARRAAVRSATVRARRRGALPSSQAAAAPRVSLMEVALARYGLFDK
DAAGACAEYARQRRTFSIHSRRGRRKLRTAVPEARLDLHGMTCSEARSALDSFFAQARERLLQKVEIVHGKGHHSKGGSV
LAPSVKRYVQAHPHAGELFHPAERRGGKGTTWVLLKRSVPLH

Sequences:

>Translated_202_residues
MRPLMAGKRRKDILPLEEALRAQSAFARTLRTWEGARRAAVRSATVRARRRGALPSSQAAAAPRVSLMEVALARYGLFDK
DAAGACAEYARQRRTFSIHSRRGRRKLRTAVPEARLDLHGMTCSEARSALDSFFAQARERLLQKVEIVHGKGHHSKGGSV
LAPSVKRYVQAHPHAGELFHPAERRGGKGTTWVLLKRSVPLH
>Mature_202_residues
MRPLMAGKRRKDILPLEEALRAQSAFARTLRTWEGARRAAVRSATVRARRRGALPSSQAAAAPRVSLMEVALARYGLFDK
DAAGACAEYARQRRTFSIHSRRGRRKLRTAVPEARLDLHGMTCSEARSALDSFFAQARERLLQKVEIVHGKGHHSKGGSV
LAPSVKRYVQAHPHAGELFHPAERRGGKGTTWVLLKRSVPLH

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y674_TREPA (O83680)

Other databases:

- EMBL:   AE000520
- PIR:   B71294
- RefSeq:   NP_219111.1
- ProteinModelPortal:   O83680
- SMR:   O83680
- GeneID:   2611579
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0674
- NMPDR:   fig|243276.1.peg.670
- TIGR:   TP_0674
- HOGENOM:   HBG251030
- OMA:   HCEDEID
- ProtClustDB:   CLSK218812
- BioCyc:   TPAL243276:TP_0674-MONOMER
- InterPro:   IPR002625
- SMART:   SM00463

Pfam domain/function: PF01713 Smr

EC number: NA

Molecular weight: Translated: 22441; Mature: 22441

Theoretical pI: Translated: 12.14; Mature: 12.14

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLMAGKRRKDILPLEEALRAQSAFARTLRTWEGARRAAVRSATVRARRRGALPSSQAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AAPRVSLMEVALARYGLFDKDAAGACAEYARQRRTFSIHSRRGRRKLRTAVPEARLDLHG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCC
MTCSEARSALDSFFAQARERLLQKVEIVHGKGHHSKGGSVLAPSVKRYVQAHPHAGELFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCCCCCC
PAERRGGKGTTWVLLKRSVPLH
HHHHCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRPLMAGKRRKDILPLEEALRAQSAFARTLRTWEGARRAAVRSATVRARRRGALPSSQAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AAPRVSLMEVALARYGLFDKDAAGACAEYARQRRTFSIHSRRGRRKLRTAVPEARLDLHG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCC
MTCSEARSALDSFFAQARERLLQKVEIVHGKGHHSKGGSVLAPSVKRYVQAHPHAGELFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCCCCCC
PAERRGGKGTTWVLLKRSVPLH
HHHHCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876