| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is tprI
Identifier: 189025846
GI number: 189025846
Start: 672512
End: 674341
Strand: Reverse
Name: tprI
Synonym: TPASS_0620
Alternate gene names: NA
Gene position: 674341-672512 (Counterclockwise)
Preceding gene: 189025847
Following gene: 189025845
Centisome position: 59.18
GC content: 57.39
Gene sequence:
>1830_bases GTGGGCAGGCAGGTGATGCAAGCGGGGGTACTTGCGGGCATGGTATGTGCTGCTTCTGGTTATGCAGGCGTACTCACTCC GCAGGTCAGTGGCACAGCCCAGCTCCAGTGGGGCATTGCGTTCCAGAAGAATCCACGCACTGGCCCGGGCAAGCACACCC ATGGGTTTCGCACTACCAATAGTCTGACTATTTCCCTGCCGTTGGTGTCAAAGCACACCCACACCCGCCGAGGGGAGGCA CGCTCAGGGGTGTGGGCACAGCTGCAGCTGAAGGACCTGGCAGTAGAGCTTGCGTCTTCTAAAAGCTCAACGGCCCTGTC CTTTACCAAACYTACCGCTTCCTTCCAGGCAACCCTGCACTGTTATGGGGCCTACCTGACAGTGGGTACCAGTCCTTCCT GTGTGGTTAACTTTGCCCAGCTGTGGAAACCCTTTGTCACCCGTGCCTATTCAGAAAAGGACACTCGCTATGCCCCTGGT TTCTCCGGYTCCGGGGCAAAACTCGGCTACCAGGCCCACAATGTGGGAAACAGCGGAGTAGATGTGGACATCGGTTTCCT CTCCTTCCTTTCCAATGGTGCCTGGGATAGTACTGACACCACGCACAGCAAGTATGGCTTCGGGGCCGATGCAACGCTTT CCTATGGCGTCGACCGTCAGCGGCTGCTTACGTTGGAGCTGGCAGGGAATGCCACACTGGACCAGAACTACGTTAAGGGT ACCGAAGACTCCACGAACGAAAACAAAACAGCACTCCTGTGGGGAGTAGGAGGCCGACTCACCCTCGAACCAGGCGCCGG CTTCCGCTTCTCCTTCGCCCTCGACGCCGGTAACCAACACCAGGACCCTGCCGATGCAGGTAATCGCCTTCTGGCAACGG GGAGCTCACGGGAGAAGTTTGACAGCGCGTTCGATGCCCTCAGGGTGGAGCAATACCGTGTAAAGGATAAGTATCTTGAA TTTTTGCTGGGACAGATGGCGGAGTCCTCGATTCTCGAGCGGGTGGGGCTTGCCCTCACGCTGCAGGACGGTACGCTCGT CTCTACGCTGACGAAGGTTGCCACTGATAGTGGAGATCGGTTTATCCAAATGGCGTTGGTAAAACTCTTGCCCCAGAGGG CGCAGGCGGAGCAGAGACTACAGGAGATTGTGGCGCCGAGTCAGTCGGACATCGTGCTTATCATGCTGCTAACCTGGCTT GAGCGTGCACGGCTGGACCGGTTCAATGCTGATGCGCTGCTTACGGCGCAGTGGACCTATGTGTCGGCTGGACTGTATGG GGCGACGGCGGGTACCAATGTATTTGGTAAGCGCGTGCTGCCTGCGCTGCGGTCCTGGCATTTTGATTTTGCCGGATTCC TCAAACTCGAAACCAAAAGCGGTGACCCCTACACCCACCTGCTCACCGGCCTGAACGCCGGCGTCGAAGCACGCGTGTAC ATCCCCCTCACCTACATCCGTTACAGAAATAACGGAGGGTACGAACTGAATGGAGCTGTGCCCCCTGGGACTATCAATAT GCCAATTTTGGGGAAGGCGTGGTGCAGCTATCGCATCCCCCTCGGTTCCCACGCCTGGCTTACACCGCATACATCCGTGC TCGGCACAACCAATCGCTTTAACGTTATTAACCCCGCGTACACCCTGTTGAATGAACGAGCGCTCCAGTACCAGGTGGGA CTGACGTTCAGTCCCTTCGAGAAGGTGGAGCTCAGCGCCCAGTGGGAACAGGGGGTGCTTGCTGACGCTCCTTACATGGG TATTGCCGAGAGTATGTGGTCTGAGCGTTACTTTGGCACGTTTATCTGTGGGGTGAAGGTGGTTTGGTGA
Upstream 100 bases:
>100_bases GGGAATCGGCCGCATCGTGTGCGGCGTCACCCTCTCCTGGTAGTCACACGCGGCTAGACGGGTGGGGGGGGTGAGGTAGA AGTGAGAGGAGGGGGAGTGA
Downstream 100 bases:
>100_bases GGGGTTGTCGTGTGGGCCAGAGAACGGGTACGGTGGGGGTGCGCGTTTTCCCCGTGGGGCTGTGCGCGCTCAGTTTACAG GCGAGGGATTGCAGGGGTAT
Product: protein TprI
Products: NA
Alternate protein names: TPR Protein J; TPR Protein D; TPR Protein B; TPR Protein H; TPR Protein G; TPR Protein I; TPR Protein E; TPR Protein K; TPR Protein L
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEA RSGVWAQLQLKDLAVELASSKSSTALSFTKXTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPG FSGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG TEDSTNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQDPADAGNRLLATGSSREKFDSAFDALRVEQYRVKDKYLE FLLGQMAESSILERVGLALTLQDGTLVSTLTKVATDSGDRFIQMALVKLLPQRAQAEQRLQEIVAPSQSDIVLIMLLTWL ERARLDRFNADALLTAQWTYVSAGLYGATAGTNVFGKRVLPALRSWHFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVY IPLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLTPHTSVLGTTNRFNVINPAYTLLNERALQYQVG LTFSPFEKVELSAQWEQGVLADAPYMGIAESMWSERYFGTFICGVKVVW
Sequences:
>Translated_609_residues MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEA RSGVWAQLQLKDLAVELASSKSSTALSFTKXTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPG FSGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG TEDSTNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQDPADAGNRLLATGSSREKFDSAFDALRVEQYRVKDKYLE FLLGQMAESSILERVGLALTLQDGTLVSTLTKVATDSGDRFIQMALVKLLPQRAQAEQRLQEIVAPSQSDIVLIMLLTWL ERARLDRFNADALLTAQWTYVSAGLYGATAGTNVFGKRVLPALRSWHFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVY IPLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLTPHTSVLGTTNRFNVINPAYTLLNERALQYQVG LTFSPFEKVELSAQWEQGVLADAPYMGIAESMWSERYFGTFICGVKVVW >Mature_608_residues GRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTNSLTISLPLVSKHTHTRRGEAR SGVWAQLQLKDLAVELASSKSSTALSFTKXTASFQATLHCYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGF SGSGAKLGYQAHNVGNSGVDVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKGT EDSTNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQDPADAGNRLLATGSSREKFDSAFDALRVEQYRVKDKYLEF LLGQMAESSILERVGLALTLQDGTLVSTLTKVATDSGDRFIQMALVKLLPQRAQAEQRLQEIVAPSQSDIVLIMLLTWLE RARLDRFNADALLTAQWTYVSAGLYGATAGTNVFGKRVLPALRSWHFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVYI PLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLTPHTSVLGTTNRFNVINPAYTLLNERALQYQVGL TFSPFEKVELSAQWEQGVLADAPYMGIAESMWSERYFGTFICGVKVVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66363; Mature: 66232
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTN CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECC SLTISLPLVSKHTHTRRGEARSGVWAQLQLKDLAVELASSKSSTALSFTKXTASFQATLH EEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEEHHHHHEEEEE CYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGFSGSGAKLGYQAHNVGNSGV EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECEEECCCCCCCC DVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC TEDSTNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQDPADAGNRLLATGSSREKF CCCCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCHHHCCEEEEECCCHHHH DSAFDALRVEQYRVKDKYLEFLLGQMAESSILERVGLALTLQDGTLVSTLTKVATDSGDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHH FIQMALVKLLPQRAQAEQRLQEIVAPSQSDIVLIMLLTWLERARLDRFNADALLTAQWTY HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEEE VSAGLYGATAGTNVFGKRVLPALRSWHFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVY EECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEE IPLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLTPHTSVLGTTNRF EEEEEEEEECCCCEEEECCCCCCCCCCCEEECCCEEEECCCCCCCEECCCCHHEECCCCC NVINPAYTLLNERALQYQVGLTFSPFEKVELSAQWEQGVLADAPYMGIAESMWSERYFGT EECCHHHHHHHCCCEEEEECCEECCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEE FICGVKVVW EEEEEEEEC >Mature Secondary Structure GRQVMQAGVLAGMVCAASGYAGVLTPQVSGTAQLQWGIAFQKNPRTGPGKHTHGFRTTN CHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEECC SLTISLPLVSKHTHTRRGEARSGVWAQLQLKDLAVELASSKSSTALSFTKXTASFQATLH EEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEEHHHHHEEEEE CYGAYLTVGTSPSCVVNFAQLWKPFVTRAYSEKDTRYAPGFSGSGAKLGYQAHNVGNSGV EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECEEECCCCCCCC DVDIGFLSFLSNGAWDSTDTTHSKYGFGADATLSYGVDRQRLLTLELAGNATLDQNYVKG EEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC TEDSTNENKTALLWGVGGRLTLEPGAGFRFSFALDAGNQHQDPADAGNRLLATGSSREKF CCCCCCCCCEEEEEECCCEEEECCCCCEEEEEEECCCCCCCCCHHHCCEEEEECCCHHHH DSAFDALRVEQYRVKDKYLEFLLGQMAESSILERVGLALTLQDGTLVSTLTKVATDSGDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCHH FIQMALVKLLPQRAQAEQRLQEIVAPSQSDIVLIMLLTWLERARLDRFNADALLTAQWTY HHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEEE VSAGLYGATAGTNVFGKRVLPALRSWHFDFAGFLKLETKSGDPYTHLLTGLNAGVEARVY EECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCCCCEEEEE IPLTYIRYRNNGGYELNGAVPPGTINMPILGKAWCSYRIPLGSHAWLTPHTSVLGTTNRF EEEEEEEEECCCCEEEECCCCCCCCCCCEEECCCEEEECCCCCCCEECCCCHHEECCCCC NVINPAYTLLNERALQYQVGLTFSPFEKVELSAQWEQGVLADAPYMGIAESMWSERYFGT EECCHHHHHHHCCCEEEEECCEECCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEE FICGVKVVW EEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA