Click here to switch to the map view.

The map label for this gene is 189025845

Identifier: 189025845

GI number: 189025845

Start: 671703

End: 672515

Strand: Reverse

Name: 189025845

Synonym: TPASS_0619

Alternate gene names: NA

Gene position: 672515-671703 (Counterclockwise)

Preceding gene: 189025846

Following gene: 189025844

Centisome position: 59.02

GC content: 60.76

Gene sequence:

>813_bases
GTGAGGGGTTGTCGTGTGGGCCAGAGAACGGGTACGGTGGGGGTGCGCGTTTTCCCCGTGGGGCTGTGCGCGCTCAGTTT
ACAGGCGAGGGATTGCAGGGGTATGTGCGGGAAGCGTCTGGGTAAAGTGATGGTGCTCGGGTGTATGTTGCCGGGTGTGG
CGGCGCGTGTTTCTCTCTCCCCCAAGCTCGGGGTGTACGGGGACGCACGCGGCGGTTCTGACCTGTGGGGCATCTGCATA
CAAGCTCCCACAATGCCAGATACAGAGAACCAGGCGCCTCCGCGCTATGCGCCGGAGACACCGTTGGTGGGGCTGGACGT
GGCGTTCCGTGCGGAAAATGGCTTCCTGCTCCAACTGACGGTGGACGCGGCACTCACGCGTTTAATGTTCTGCGGCCGGT
GTTTGGCCGGTTATTCGTTCAGACCGGGGGAAGGTAGTACGCATCTGTCGGTAGCGGCGGGTTTTGAGTGCACCGCGCTC
ATCTACGATAGCCAGCACTTTCTTTCGGTTCTTGGGCAGGGCTTACTGCAGCCGAGCAGCTCGTCTTATTCAGCCGGTAA
CTGGCACCGCCCACGTTCATTGCTTGGCGTGCTAACGTGCACTGCCAAGGAGGTAGGCGCCATACACGAAGAGTCGCGTA
TTAAAGGGGTCTGTCAGAACTATGCGGTGCCGGTGCAGCTGGGGGTGCAGCACTACTTTGGCGCGCATTGGGGGATAGAC
GCGACGGCTACCGTTTCGTTTGGCATTGACACCAAGCTGGCTAAGTTCCGCATCCCGTATACGTTGCGCGTTGGCCCGGT
CTTCCGCACCTAG

Upstream 100 bases:

>100_bases
AACAGGGGGTGCTTGCTGACGCTCCTTACATGGGTATTGCCGAGAGTATGTGGTCTGAGCGTTACTTTGGCACGTTTATC
TGTGGGGTGAAGGTGGTTTG

Downstream 100 bases:

>100_bases
GGGAGGCGCCGGGAGGAACGGGTCCTGTCGAAGAATTGCGGGGAGGAGTGAAGGTATGTGGAGAAAATGTCTGGGTAAAG
TGGTGCTACTCGGGTGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRGCRVGQRTGTVGVRVFPVGLCALSLQARDCRGMCGKRLGKVMVLGCMLPGVAARVSLSPKLGVYGDARGGSDLWGICI
QAPTMPDTENQAPPRYAPETPLVGLDVAFRAENGFLLQLTVDAALTRLMFCGRCLAGYSFRPGEGSTHLSVAAGFECTAL
IYDSQHFLSVLGQGLLQPSSSSYSAGNWHRPRSLLGVLTCTAKEVGAIHEESRIKGVCQNYAVPVQLGVQHYFGAHWGID
ATATVSFGIDTKLAKFRIPYTLRVGPVFRT

Sequences:

>Translated_270_residues
MRGCRVGQRTGTVGVRVFPVGLCALSLQARDCRGMCGKRLGKVMVLGCMLPGVAARVSLSPKLGVYGDARGGSDLWGICI
QAPTMPDTENQAPPRYAPETPLVGLDVAFRAENGFLLQLTVDAALTRLMFCGRCLAGYSFRPGEGSTHLSVAAGFECTAL
IYDSQHFLSVLGQGLLQPSSSSYSAGNWHRPRSLLGVLTCTAKEVGAIHEESRIKGVCQNYAVPVQLGVQHYFGAHWGID
ATATVSFGIDTKLAKFRIPYTLRVGPVFRT
>Mature_270_residues
MRGCRVGQRTGTVGVRVFPVGLCALSLQARDCRGMCGKRLGKVMVLGCMLPGVAARVSLSPKLGVYGDARGGSDLWGICI
QAPTMPDTENQAPPRYAPETPLVGLDVAFRAENGFLLQLTVDAALTRLMFCGRCLAGYSFRPGEGSTHLSVAAGFECTAL
IYDSQHFLSVLGQGLLQPSSSSYSAGNWHRPRSLLGVLTCTAKEVGAIHEESRIKGVCQNYAVPVQLGVQHYFGAHWGID
ATATVSFGIDTKLAKFRIPYTLRVGPVFRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To T.pallidum TP_0127, TP_0315 and TP_0618

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y619_TREPA (O83628)

Other databases:

- EMBL:   AE000520
- PIR:   D71301
- RefSeq:   NP_219057.1
- ProteinModelPortal:   O83628
- IntAct:   O83628
- GeneID:   2611653
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0619
- NMPDR:   fig|243276.1.peg.616
- TIGR:   TP_0619
- HOGENOM:   HBG731969
- ProtClustDB:   CLSK227508
- BioCyc:   TPAL243276:TP_0619-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28911; Mature: 28911

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGCRVGQRTGTVGVRVFPVGLCALSLQARDCRGMCGKRLGKVMVLGCMLPGVAARVSLS
CCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC
PKLGVYGDARGGSDLWGICIQAPTMPDTENQAPPRYAPETPLVGLDVAFRAENGFLLQLT
CCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE
VDAALTRLMFCGRCLAGYSFRPGEGSTHLSVAAGFECTALIYDSQHFLSVLGQGLLQPSS
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHCCCCC
SSYSAGNWHRPRSLLGVLTCTAKEVGAIHEESRIKGVCQNYAVPVQLGVQHYFGAHWGID
CCCCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCC
ATATVSFGIDTKLAKFRIPYTLRVGPVFRT
EEEEEEECCCCEEEEEECCEEEEECCEECC
>Mature Secondary Structure
MRGCRVGQRTGTVGVRVFPVGLCALSLQARDCRGMCGKRLGKVMVLGCMLPGVAARVSLS
CCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECC
PKLGVYGDARGGSDLWGICIQAPTMPDTENQAPPRYAPETPLVGLDVAFRAENGFLLQLT
CCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEE
VDAALTRLMFCGRCLAGYSFRPGEGSTHLSVAAGFECTALIYDSQHFLSVLGQGLLQPSS
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHCCCCC
SSYSAGNWHRPRSLLGVLTCTAKEVGAIHEESRIKGVCQNYAVPVQLGVQHYFGAHWGID
CCCCCCCCCCHHHHHHHHHHCHHHHHCHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCC
ATATVSFGIDTKLAKFRIPYTLRVGPVFRT
EEEEEEECCCCEEEEEECCEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876