| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025779
Identifier: 189025779
GI number: 189025779
Start: 598507
End: 599595
Strand: Reverse
Name: 189025779
Synonym: TPASS_0551
Alternate gene names: NA
Gene position: 599595-598507 (Counterclockwise)
Preceding gene: 189025780
Following gene: 189025778
Centisome position: 52.62
GC content: 57.12
Gene sequence:
>1089_bases ATGGAAGAATTTATATTCTGGAACTTGTCCGTCATACACGCGGTGCAGCAGGCTGCGCACCCTGTGATAACACACGCGGT TGTTCTTTTTACCTTCTTTGGAGGGAAGGGTATCGCCCTGTGTTCGCTCTGGGTGCTGTGGTGCGTAGAGTACCGAAAGG GTTTAGCCATTGCCTACGCATTGGCATGTAGCGAGGGGCTCAATTACGCCCTGAAGGGGCTGTTGCGTGTCCCGCGGCCC TTTGTGCGTGACCCGTCGGTGAAACTTGTGTTCCACGATGGTTTTTCTACACCCTCCGGGCATGCACAGGCGAGTGCTTT GTTTGTGTTGCTCGCGCGTAGCTATCCGTCTGCGAAGACTCCTGTTCCCTGCTTTTGTGCGCCAGGTTGTGGAACCGATA GGCAGGTAGGGGATCGGGAGAACCCGTCGTCTTATGGACAGGAGCGTACCCCGCTGGCGCGCACTGCATGGACGGGCGTG GCGGGCGTGCTATTTGTAGGAGTCATTGGGCTTTCTCGTGTGTATTTGGGCGTGCACTATCCTATTGATGTGCTTCTTGG TTGGTTAAACGCAGTACTTTTTGGCGCGCTGATTCTCGGTATGCGGCGCGCGCTCAGGCGTGGGGTTGTGTTCTTTACGC GCATACAGGAGGTCTCAGGACGCAGTTTTGCGGGGTTGCGCTTTTCTGCCGTGGTGTGCATAGCACTCTTGCTAGCTGTC GGTGGGGCGGATGTGTCGATGTGTGGTGCATTCTGCGGGTTAGGAGCAGGGCACCTCTTTATCTTTGATCGTTGGGTTAC GCGCAGGGCACCTGCAGGCGGCGTGGGGTTTCATGCTGCTGGGGGGTCTTTCACCCAGAAGGTGGTGCGCTTTTGCGTAG GGTGTGTGTTCTGTAGTGTGGTGTCTTCTGCGCTTCATGCACTGTTCTCGGGTGCGCCCGCTGAGTATGCACGCCTGTTG CGTTTTGTGCGTTATGGTATAGGAGCTTCCCTGAGTACGGGAGTGGTGCCGCTGCTTTTTCTCCGTGTGGGACTTGCAGG CGGCTTGCCTTTTCACGCACCTGCGCCCACGGCCGTGAGGGAACGGTAG
Upstream 100 bases:
>100_bases GGAGCGCGCTCCGGATAGAGTTTATTGGCTTGAGGATCTGCCGCACAGGACGGAGCGCGGATCGATGCAGACGCGCGTGT CAAAGTGAGGATAGGACACC
Downstream 100 bases:
>100_bases CTGATGCGCGCACATGAGTATGCGCTCGACGATGACATCGTCGCCATTGCCACGGCGCTCAGTCCTGCCGCGTTAGGTAT TGTCCGCACGAGTGGGAGCA
Product: phosphatase
Products: NA
Alternate protein names: PAP2 Family Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYALACSEGLNYALKGLLRVPRP FVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKTPVPCFCAPGCGTDRQVGDRENPSSYGQERTPLARTAWTGV AGVLFVGVIGLSRVYLGVHYPIDVLLGWLNAVLFGALILGMRRALRRGVVFFTRIQEVSGRSFAGLRFSAVVCIALLLAV GGADVSMCGAFCGLGAGHLFIFDRWVTRRAPAGGVGFHAAGGSFTQKVVRFCVGCVFCSVVSSALHALFSGAPAEYARLL RFVRYGIGASLSTGVVPLLFLRVGLAGGLPFHAPAPTAVRER
Sequences:
>Translated_362_residues MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYALACSEGLNYALKGLLRVPRP FVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKTPVPCFCAPGCGTDRQVGDRENPSSYGQERTPLARTAWTGV AGVLFVGVIGLSRVYLGVHYPIDVLLGWLNAVLFGALILGMRRALRRGVVFFTRIQEVSGRSFAGLRFSAVVCIALLLAV GGADVSMCGAFCGLGAGHLFIFDRWVTRRAPAGGVGFHAAGGSFTQKVVRFCVGCVFCSVVSSALHALFSGAPAEYARLL RFVRYGIGASLSTGVVPLLFLRVGLAGGLPFHAPAPTAVRER >Mature_362_residues MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYALACSEGLNYALKGLLRVPRP FVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKTPVPCFCAPGCGTDRQVGDRENPSSYGQERTPLARTAWTGV AGVLFVGVIGLSRVYLGVHYPIDVLLGWLNAVLFGALILGMRRALRRGVVFFTRIQEVSGRSFAGLRFSAVVCIALLLAV GGADVSMCGAFCGLGAGHLFIFDRWVTRRAPAGGVGFHAAGGSFTQKVVRFCVGCVFCSVVSSALHALFSGAPAEYARLL RFVRYGIGASLSTGVVPLLFLRVGLAGGLPFHAPAPTAVRER
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38680; Mature: 38680
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH LACSEGLNYALKGLLRVPRPFVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC PVPCFCAPGCGTDRQVGDRENPSSYGQERTPLARTAWTGVAGVLFVGVIGLSRVYLGVHY CCCEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIDVLLGWLNAVLFGALILGMRRALRRGVVFFTRIQEVSGRSFAGLRFSAVVCIALLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GGADVSMCGAFCGLGAGHLFIFDRWVTRRAPAGGVGFHAAGGSFTQKVVRFCVGCVFCSV CCCCHHHHHHHHCCCCCHHHEEHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH VSSALHALFSGAPAEYARLLRFVRYGIGASLSTGVVPLLFLRVGLAGGLPFHAPAPTAVR HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHC ER CC >Mature Secondary Structure MEEFIFWNLSVIHAVQQAAHPVITHAVVLFTFFGGKGIALCSLWVLWCVEYRKGLAIAYA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHH LACSEGLNYALKGLLRVPRPFVRDPSVKLVFHDGFSTPSGHAQASALFVLLARSYPSAKT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC PVPCFCAPGCGTDRQVGDRENPSSYGQERTPLARTAWTGVAGVLFVGVIGLSRVYLGVHY CCCEEECCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PIDVLLGWLNAVLFGALILGMRRALRRGVVFFTRIQEVSGRSFAGLRFSAVVCIALLLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GGADVSMCGAFCGLGAGHLFIFDRWVTRRAPAGGVGFHAAGGSFTQKVVRFCVGCVFCSV CCCCHHHHHHHHCCCCCHHHEEHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH VSSALHALFSGAPAEYARLLRFVRYGIGASLSTGVVPLLFLRVGLAGGLPFHAPAPTAVR HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA