| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025725
Identifier: 189025725
GI number: 189025725
Start: 531168
End: 531989
Strand: Direct
Name: 189025725
Synonym: TPASS_0494
Alternate gene names: NA
Gene position: 531168-531989 (Clockwise)
Preceding gene: 189025724
Following gene: 189025726
Centisome position: 46.62
GC content: 52.07
Gene sequence:
>822_bases ATGGTTCCTGCAAATGTTTTCGAGAACTTACGGGCACTGCAGGTGGTGCTTGCGCAGAAGAATCGCTTGGAAACCGAGAT TGCAGAGGCGCCGAAGTTCTTAGTCGCTCAGGAAGAGTTGCTAACGCGTTGTAAAGAAAGTTTTATTGAAAAGAATGTCG AATACGAATCTGTGCGCGAAGAAGTTGCCCGTCTGACCACCGAGTTGTGCAAGGCAGAGAAGCGGCGTGAGGATGCGGAA GTTGCGATGGACAACATTAGCACGCAGCGGGAGTACGATGCGCTCGATAGGGAGATTCAGGAGGCGAAGCGGCAGGAGGT TGCATTGCGCTCCGAGGTAGCGCGCTCGGATGTAGCTTATAAGCGTTTGGCAGAAGAAATTAAGCTTGATCAAGAAGACA TTGTGCAGCAGGAGAGGGAGCTTACGGAGAACAAGGCTCGCGTCGACGCAGAGGTGCGTGGTAAAAGGGAGCAGGTGTTG CGTTTACAGGAGGAAGAGCGGCGTCTTTCTCCAGATCTTGACCGGGATGTACTCTTTAAGTTTGAGCGTATTATCAAAAG TAAGCAGGGCGTGGGTATCGTACCCGTGCGGGGGAACGTGTGTGCAGGGTGCCACATGATTTTGCCCGCGCAGTTTTCAA CCGGCGTACGTGAAGGGAACAGTATCGTGTACTGCCCCTATTGCAGTCGGATTCTTTACTATGAGGAGACAGATGAGCCT GAGATGACCTTCTTTGATGAAGAGGACCTGGGCAGTCTGTCGGACCTTGTCTATCCAGAAGAATCTGGAGGATTTGGGGG AGGTGACCGGGAAGAGATATAG
Upstream 100 bases:
>100_bases TGAGCGTATTCGGCAGATAGAGGCGAAGGCCCTTAAGCGTTTGCGTCATCCACGACACAGCAGAAGATTGAAGGATTTCC TTGACAGTTAGGGGTATGTT
Downstream 100 bases:
>100_bases AGAGGTTGGTAAATGGGGTGACAGAGAACTGCAGATAGTCGCTGCGGGTTTCTCGCAGAGGAAAGTCCGGACTCCTTCGG AAATGATGCTAGTTAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVREEVARLTTELCKAEKRREDAE VAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAYKRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVL RLQEEERRLSPDLDRDVLFKFERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEP EMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI
Sequences:
>Translated_273_residues MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVREEVARLTTELCKAEKRREDAE VAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAYKRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVL RLQEEERRLSPDLDRDVLFKFERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEP EMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI >Mature_273_residues MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVREEVARLTTELCKAEKRREDAE VAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAYKRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVL RLQEEERRLSPDLDRDVLFKFERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEP EMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31434; Mature: 31434
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EVARLTTELCKAEKRREDAEVAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVLRLQEEERRLSPDLDRDVLFK HHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH FERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEP HHHHHHCCCCCEEEEECCCCCCCHHEEECCHHHHHHCCCCCEEECCCCCEEEEECCCCCC EMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI CEEEECCHHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVPANVFENLRALQVVLAQKNRLETEIAEAPKFLVAQEELLTRCKESFIEKNVEYESVRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH EVARLTTELCKAEKRREDAEVAMDNISTQREYDALDREIQEAKRQEVALRSEVARSDVAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRLAEEIKLDQEDIVQQERELTENKARVDAEVRGKREQVLRLQEEERRLSPDLDRDVLFK HHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH FERIIKSKQGVGIVPVRGNVCAGCHMILPAQFSTGVREGNSIVYCPYCSRILYYEETDEP HHHHHHCCCCCEEEEECCCCCCCHHEEECCHHHHHHCCCCCEEECCCCCEEEEECCCCCC EMTFFDEEDLGSLSDLVYPEESGGFGGGDREEI CEEEECCHHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA