| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is cyaB [H]
Identifier: 189025716
GI number: 189025716
Start: 516976
End: 518820
Strand: Reverse
Name: cyaB [H]
Synonym: TPASS_0485
Alternate gene names: 189025716
Gene position: 518820-516976 (Counterclockwise)
Preceding gene: 189025717
Following gene: 189025715
Centisome position: 45.53
GC content: 52.3
Gene sequence:
>1845_bases ATGAGCAGAAAGAACGCGAATCAGAAAATTGTGTGGCCGCTTACGACGAAACTCATCGGTATTATCAGCACGGTGGTGGT GCTCGCCACCATTGCGGTTACGGCCATGGCTTCCTGGTTCTTCGCTTCGAGTCTGCACAGTAATGCTGAGCTTAATAATC TTGCCGCTGCGGAGAACTTTGCTGCGCAAATCAAAGGGGAATTCGAAGCCATTGCCACAAGCGCCAAGTCCTTCGTTTCC CTTGGCCTCAGAAGTGGCGCGCGCATGCACTCGCGGTCCGCACTTTCTAAAGATTTTTTTTCCTTTTACCCGCGCATCGG CTACATCGGAGTCGGCGGTGTAGCCGAGCTGTGGAACGGTGACTTCTTCAAGAAAAATCAGCTGCGGGTGGCAGACGCTC GTCGCTTCCTAGCTGACAACGCACAGGTTATTTCCACACTTCAAACTGCCCCAGCCACGCTCAACGCCGCCCCCTGGTTT AAAGCGCAGATCATTGCTATCGTCGCGCCCTTTGAAGTTGACGGCGCTACGCGTAACGTTGTGGTTATCTTCTCAGCGGA TGTCGTTCAGCACCTGCTAGAATCTGGAGCCTCCTCCGGAACCATGTATGCCGTCACCTGGGCGGGGAACTCCCTGTACC ACCCGGAATACTCTCTCAATTACAGCAACATTAACTTGCAGGACTCGCCCGTTGTGCGCGATTTACGCGAATCTACACAG CTGACCAAACAAATCAGCTTCATCGGCACGGACAACAAGCGCTACTTCGGCGCGTTCGCCAAGCAAACCTTTGGAAAGTT CGCCATAGTCCTAGAAACGCCTATGAGTGTGGTGTACCAGGCAGTATATTACGCGATTATCCTCGACGGTATCCTCACCG GCATGGTGCTCCTCGCCTCTATCTTGCTTGTCTGGTTCATTGCGCAGTCTATCACCCGCCCTATCCTTACCCTCGTCGGC GCAACGCACGCTATCAGCTCAGGACAGTTCCTCCTGGATATCAAGCCTTCAAGCAAAGACGAAATTGGCCTCCTCACCGA AACATTCGTGAGTATGGGGCGTGGTCTGGCAGAACGGGAACGCATGAAAGAAGCGTTTGGCAAATTTGTAAATAGAGACA TCGCAGAGAAGGCCATGAAGGGAGAGCTCGCACTGGGAGGGGAACGGAAAACCGCTACCATTTTTTTCTCAGACGTGCGC TCCTTTACTGAGATGTCAGAGAAGCTTCCCCCTGAGGACGTAGTAGAGTTTCTCAACGAGTACATGAGCTGTATGGTAGA CTGCATCGAGCAGACAGGCGGCGTGGTGGACAAGTTTATTGGAGATGCGATTATGGCGATATGGGGAGCGCCAGTTTCCC TCGGCTCTGCACGCTTAGACGCATTGCAGAGCATGAAAGCGGTCTTCCTCATGCGCGAAAGCCTTATTCAACTGAACGAA AAGCGCGTCGCATGCTCAAAGCCTCGCATTGGCATCGGATGCGGCGTAAACACAGGCTCCTGCGTCGCAGGTCAAATCGG CTCTTCCAAACGTATGGAATACACCGTCATCGGAGACGCGGTGAACACCGCAAGCAGGATCGAAGCACTGAATAAGCCGT TCGGCACTGACTTTCTTATCTCCGAAAACACATATGAGCTTGTTAAAGATATGCTTATAGTGGAGAAAATGCCCCCCATA ACGGTAAAAGGAAAACGAGAACCACTGAATGTGTACGCTGCTATCAATCTAAAGGGGCATGACGGACCGCAGACGCTCGA TGAGCTGCGTGCACTTCTTTCCATTGAAAAGCCGGGGCTTTCTGCCGACCCTGACTTCGAAGAAAAGAAGTGTGAAGTTA TCTAA
Upstream 100 bases:
>100_bases CCGCCGTCACCGTCACTCCGCGCGGAATTATGGTGCAAACAAAAGAGAAAGGTATGGCCCTATTGCACACACGGACGCTC GCCGACGCGCTACCCAGAAC
Downstream 100 bases:
>100_bases GCAGGATGCCACGGTTACGGTCGTTATTCTCCTCCTTATCCTGCTTCTCGGCTGGGGCTACTCCCGCGCGCTCCGTCTGT CCCAGGGGAAGGGAAATCCA
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MSRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENFAAQIKGEFEAIATSAKSFVS LGLRSGARMHSRSALSKDFFSFYPRIGYIGVGGVAELWNGDFFKKNQLRVADARRFLADNAQVISTLQTAPATLNAAPWF KAQIIAIVAPFEVDGATRNVVVIFSADVVQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNINLQDSPVVRDLRESTQ LTKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLASILLVWFIAQSITRPILTLVG ATHAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERERMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVR SFTEMSEKLPPEDVVEFLNEYMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNE KRVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLISENTYELVKDMLIVEKMPPI TVKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGLSADPDFEEKKCEVI
Sequences:
>Translated_614_residues MSRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENFAAQIKGEFEAIATSAKSFVS LGLRSGARMHSRSALSKDFFSFYPRIGYIGVGGVAELWNGDFFKKNQLRVADARRFLADNAQVISTLQTAPATLNAAPWF KAQIIAIVAPFEVDGATRNVVVIFSADVVQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNINLQDSPVVRDLRESTQ LTKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLASILLVWFIAQSITRPILTLVG ATHAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERERMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVR SFTEMSEKLPPEDVVEFLNEYMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNE KRVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLISENTYELVKDMLIVEKMPPI TVKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGLSADPDFEEKKCEVI >Mature_613_residues SRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENFAAQIKGEFEAIATSAKSFVSL GLRSGARMHSRSALSKDFFSFYPRIGYIGVGGVAELWNGDFFKKNQLRVADARRFLADNAQVISTLQTAPATLNAAPWFK AQIIAIVAPFEVDGATRNVVVIFSADVVQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNINLQDSPVVRDLRESTQL TKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLASILLVWFIAQSITRPILTLVGA THAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERERMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVRS FTEMSEKLPPEDVVEFLNEYMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNEK RVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLISENTYELVKDMLIVEKMPPIT VKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGLSADPDFEEKKCEVI
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI167830411, Length=174, Percent_Identity=29.8850574712644, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4580422, Length=174, Percent_Identity=29.8850574712644, Blast_Score=73, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71982300, Length=176, Percent_Identity=30.1136363636364, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17534655, Length=218, Percent_Identity=28.4403669724771, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI212645052, Length=315, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17534649, Length=176, Percent_Identity=31.25, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17534653, Length=176, Percent_Identity=31.25, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17534657, Length=193, Percent_Identity=29.0155440414508, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17534651, Length=176, Percent_Identity=30.1136363636364, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17561804, Length=176, Percent_Identity=31.25, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17561802, Length=176, Percent_Identity=31.25, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193207841, Length=232, Percent_Identity=28.8793103448276, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71989822, Length=252, Percent_Identity=29.7619047619048, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17561800, Length=176, Percent_Identity=30.6818181818182, Blast_Score=78, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71989805, Length=252, Percent_Identity=29.7619047619048, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17534665, Length=156, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI212645647, Length=151, Percent_Identity=35.0993377483444, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71995305, Length=178, Percent_Identity=29.2134831460674, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17534659, Length=173, Percent_Identity=30.635838150289, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71995893, Length=202, Percent_Identity=28.7128712871287, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71995895, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71995899, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71995300, Length=175, Percent_Identity=29.1428571428571, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508769, Length=184, Percent_Identity=31.5217391304348, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561794, Length=183, Percent_Identity=32.7868852459016, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193206632, Length=211, Percent_Identity=26.0663507109005, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI193206054, Length=249, Percent_Identity=28.1124497991968, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI221330470, Length=180, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI221330468, Length=180, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI161076872, Length=225, Percent_Identity=28.8888888888889, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI28574512, Length=225, Percent_Identity=28.8888888888889, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647268, Length=217, Percent_Identity=26.7281105990783, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI85725044, Length=198, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24663839, Length=177, Percent_Identity=28.2485875706215, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24663843, Length=177, Percent_Identity=28.2485875706215, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI62484477, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI62484298, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI116008008, Length=235, Percent_Identity=27.2340425531915, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281366459, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281366457, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281366455, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI56292422, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI56292424, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24666940, Length=214, Percent_Identity=29.4392523364486, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI161078020, Length=230, Percent_Identity=28.695652173913, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 67031; Mature: 66900
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENF CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AAQIKGEFEAIATSAKSFVSLGLRSGARMHSRSALSKDFFSFYPRIGYIGVGGVAELWNG HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCC DFFKKNQLRVADARRFLADNAQVISTLQTAPATLNAAPWFKAQIIAIVAPFEVDGATRNV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHEEEEEEEECEEECCCCCCE VVIFSADVVQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNINLQDSPVVRDLRESTQ EEEEEHHHHHHHHHCCCCCCEEEEEEECCCEEECCCEEECCCCCCCCCCHHHHHHHHHHH LTKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLAS HHHHHHEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLVWFIAQSITRPILTLVGATHAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH RMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVRSFTEMSEKLPPEDVVEFLNE HHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHH YMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCC KRVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLI CHHCCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEE SENTYELVKDMLIVEKMPPITVKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGL CCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC SADPDFEEKKCEVI CCCCCCCCCCCCCC >Mature Secondary Structure SRKNANQKIVWPLTTKLIGIISTVVVLATIAVTAMASWFFASSLHSNAELNNLAAAENF CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AAQIKGEFEAIATSAKSFVSLGLRSGARMHSRSALSKDFFSFYPRIGYIGVGGVAELWNG HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCC DFFKKNQLRVADARRFLADNAQVISTLQTAPATLNAAPWFKAQIIAIVAPFEVDGATRNV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHEEEEEEEECEEECCCCCCE VVIFSADVVQHLLESGASSGTMYAVTWAGNSLYHPEYSLNYSNINLQDSPVVRDLRESTQ EEEEEHHHHHHHHHCCCCCCEEEEEEECCCEEECCCEEECCCCCCCCCCHHHHHHHHHHH LTKQISFIGTDNKRYFGAFAKQTFGKFAIVLETPMSVVYQAVYYAIILDGILTGMVLLAS HHHHHHEEECCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLVWFIAQSITRPILTLVGATHAISSGQFLLDIKPSSKDEIGLLTETFVSMGRGLAERE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHH RMKEAFGKFVNRDIAEKAMKGELALGGERKTATIFFSDVRSFTEMSEKLPPEDVVEFLNE HHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHH YMSCMVDCIEQTGGVVDKFIGDAIMAIWGAPVSLGSARLDALQSMKAVFLMRESLIQLNE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCC KRVACSKPRIGIGCGVNTGSCVAGQIGSSKRMEYTVIGDAVNTASRIEALNKPFGTDFLI CHHCCCCCCEEEECCCCCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEE SENTYELVKDMLIVEKMPPITVKGKREPLNVYAAINLKGHDGPQTLDELRALLSIEKPGL CCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC SADPDFEEKKCEVI CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]