| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025687
Identifier: 189025687
GI number: 189025687
Start: 485615
End: 486619
Strand: Reverse
Name: 189025687
Synonym: TPASS_0455
Alternate gene names: NA
Gene position: 486619-485615 (Counterclockwise)
Preceding gene: 189025688
Following gene: 189025686
Centisome position: 42.71
GC content: 52.74
Gene sequence:
>1005_bases GTGCCGACACTACGTTGGCAGGGGTGGCGGATGAAGCTAAAGCGCTCATTAATAGTCGGGGGAGGCCTGTTGCTTTGCTG TGCGCACGGATATGCGCAGGCGAAGGGAGCACGGGCGTCTGTGCATATTGCGTACCATAATCGCACGATTTACTTCCCCG GCACCCACGAATCTGAACCCATTTGGGTGAAAGTTTCACTTACAAATACGGGAAAGGACACGTTGCGCTTCAAACTGGCG GACGACCGTACCTTTAGTGTTGATTTTTCTATACGGACGATGAAGAACCGCGCGCTTGCGCACACGGACGAATGGATACG CAAGCGGAGCACTCATCGTCCTGTGTATTTTAGGGAGATCAGCCTTGAGCCGGGGGAAAGCTACTCTTTTGTGGAAAATG TGAAGCATTACCTTGATGTGCAGTCGGCAGGGTTGTACTTTCTAACCCTTCTCTTCTACCCCGAACTGAAAAGGGAGCGC ACCGGTGACGAGGACCATCTGGCATCTAATACGCTAACTCTTGAGGTACAGCCTGCCCCTGCTGCGGCGGCGCTCGGCGC GTTGCCGGTTTCTCCCCCCGTGGGTGAAGTTCTGCAACCGCAACGTCTTTCCCCGGATAGGGTTATCGAGTACGTGCTGA ATGCACGGCAAAAATCTCACTGGGAACGCTTTTTTCTGTATCTTGACTTGGCAAAAATGCTTTCTCGGGATGCGGGGCGC AGTCGCCGCTTTAACGCAGAGTCTGAGGCAGGACGCTACAACATGATTGATACCTATAAGCACGAGCTACGCCAGGAGCG TGTGGATAAGGATATTGCTGCCATACCCGTTGAATTCCGTATTGAAAAAACCGTGTATACTGCTACGGACGCGGAGGTTC GCGTGCTTGAGTGGTTTGAGTACCGGGATTTCCGGGAAAAGAAGCGCTTTACCTATCACCTGTCCTCCCGCGACGGCATC TGGTATGTACACGATTACGTAGTTGAGAATTTGGGAACAGAATGA
Upstream 100 bases:
>100_bases CAGGTCTTTTATGCACCGAGGTAGAATCCCTTACAGGAACATAAACGCTCCCGGGAGCCTGCTCTATGTCCTACAAATTC TGTAAGGACCCCCACGTCAG
Downstream 100 bases:
>100_bases TGAAGGCACTTTTAGTCGCAGATGATCCCGTTTCGGTGAATCTGGTATTTGAAAACCACACGCAGTGCGGTTATGAGGTG ATCCACTACCGTTCTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPTLRWQGWRMKLKRSLIVGGGLLLCCAHGYAQAKGARASVHIAYHNRTIYFPGTHESEPIWVKVSLTNTGKDTLRFKLA DDRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREISLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRER TGDEDHLASNTLTLEVQPAPAAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGR SRRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFEYRDFREKKRFTYHLSSRDGI WYVHDYVVENLGTE
Sequences:
>Translated_334_residues MPTLRWQGWRMKLKRSLIVGGGLLLCCAHGYAQAKGARASVHIAYHNRTIYFPGTHESEPIWVKVSLTNTGKDTLRFKLA DDRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREISLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRER TGDEDHLASNTLTLEVQPAPAAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGR SRRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFEYRDFREKKRFTYHLSSRDGI WYVHDYVVENLGTE >Mature_333_residues PTLRWQGWRMKLKRSLIVGGGLLLCCAHGYAQAKGARASVHIAYHNRTIYFPGTHESEPIWVKVSLTNTGKDTLRFKLAD DRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREISLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRERT GDEDHLASNTLTLEVQPAPAAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGRS RRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFEYRDFREKKRFTYHLSSRDGIW YVHDYVVENLGTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38896; Mature: 38764
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLRWQGWRMKLKRSLIVGGGLLLCCAHGYAQAKGARASVHIAYHNRTIYFPGTHESEP CCCCCCCHHHHHHHHHEEECCCEEEEECCCHHHCCCCCEEEEEEEECEEEECCCCCCCCC IWVKVSLTNTGKDTLRFKLADDRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREI EEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE SLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRERTGDEDHLASNTLTLEVQPAP ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCC AAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGR HHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SRRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEEEEEEEEECCCCEEEEHHHH YRDFREKKRFTYHLSSRDGIWYVHDYVVENLGTE HHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCC >Mature Secondary Structure PTLRWQGWRMKLKRSLIVGGGLLLCCAHGYAQAKGARASVHIAYHNRTIYFPGTHESEP CCCCCCHHHHHHHHHEEECCCEEEEECCCHHHCCCCCEEEEEEEECEEEECCCCCCCCC IWVKVSLTNTGKDTLRFKLADDRTFSVDFSIRTMKNRALAHTDEWIRKRSTHRPVYFREI EEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEE SLEPGESYSFVENVKHYLDVQSAGLYFLTLLFYPELKRERTGDEDHLASNTLTLEVQPAP ECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCC AAAALGALPVSPPVGEVLQPQRLSPDRVIEYVLNARQKSHWERFFLYLDLAKMLSRDAGR HHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SRRFNAESEAGRYNMIDTYKHELRQERVDKDIAAIPVEFRIEKTVYTATDAEVRVLEWFE CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEEEEEEEEECCCCEEEEHHHH YRDFREKKRFTYHLSSRDGIWYVHDYVVENLGTE HHHHHHCCCEEEEECCCCCEEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA