| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is atpI1
Identifier: 189025662
GI number: 189025662
Start: 457882
End: 459750
Strand: Direct
Name: atpI1
Synonym: TPASS_0429
Alternate gene names: 189025662
Gene position: 457882-459750 (Clockwise)
Preceding gene: 189025661
Following gene: 189025663
Centisome position: 40.18
GC content: 53.24
Gene sequence:
>1869_bases GTGATAGTTCCTATGAAAAAGGTAACGCTTCTGGTGCTCGGTTCTGAGCAAGAGCGTTCGCTGCAGGCGTTGCGTTCCTT TGGTGCTGTGCATGTGCAGTTGCGGGAGTGTGCAAGTGAGCAACTTGCAGAGTTGCACGCGTTGGACGCTCGGTGCGTGC AGGCCATTGCGCTCGTCACTGACGCTCAGACAAAGAATGTTACCCGAGGAGAGGAGTGTCGCGTTGCAGGTCAGGTGGTA GAAGCAGCAGAGGCCGTGGAACAGATCGTACGTACTCATTCAGACCGCGTGGAACTTGCTCAGCGCATTGCGCAGTGCAT TGCGCATCTGGAACGCTGTGAGCCGTGGGGGGATTTCGATCCGGCAGATGTGAGGGCACTCGCACAGCGGGGGATACATC TTATCCCCGTGGAGCTTTCTGAGCGTTCATACCGCTGCTTGCCCGATGAGTTGCAGACGCTTTGTCTTGCTCGTCGCGGG GGCTTGGTGCGCTGTGTGCTTGTGGCAGATAAACCGGGGCTGCCGCCATCTCTTCCTGCCGATGCGCGCGCGCTAGAATT GCCAGACGTTTCTCCCGCTGATCTGTTTGTACGGCTCAGGCAGTTGCGTGAGGAGTGCGCTACGCTAACACAACGGCTTC TTGCTTATTCGGAATACCAAGGGGCGATTCGCGCCTTGCGGCAGAAGATTGCCGCAGATATCGAGTTTGAGCGCGTGCAT CTCAGTATGGTTTCGGTAGACGTCAGTCAGTGGCGTGAAACAGGAGAGACGTTGCGCATTGCGCACGTCAGTGGGTACCT GCCTGTTTCCCGGGTGCGTGCCTTTTCTGAGTGTGCGCGGAAGGAAGCGTGGGCGTATTGCTGTGTAGACCCTATGCCTG AGGATCCGGTACCTACACAGCTGAGAAATAACCGTTGGGTAAATTTGATTTCCCCGTTGATGAATTTCCTCGGCACTGTG CCCGGCTATTGGGAGGTAGACATTTCTGGCTTCTTTTTGCTCTTTTTTGGCGTGTTCTTCTCAATCATCTTTGCGGACGC AGGCTACGGCGCAGTCCTCACGCTTGTGTCCTTGGGAGGGATTGTTCTCAGCAAGAGAAAACATGCAGTGGTGAGTCCAG CATGGTGCTTGGGACTATACTTAGGAACGCTCACGATGGTGTGGGGTGCGCTCGTGTGTAACTGGTTTGGTGTGCCTGTC CAGTATGTGCCGGCGTCGCTCGCGCGTATTGCAGTTTGGGAGATTTCAGGCTTTGCGGATGCCGCCCAGCGGAATAAGAA TCAGATGCACGTGTGTTTCTTTCTCGGTTTATTGCACCTGTGTCTCGGTCATTTGATCGTCGTGCGGCGCACCTTCCGTT CCCTGAGGGTGCTTGCAGAGTTTGGTTCTCTTCTCATGTTGGGTGGTATGTACGTGGTAGTGCTCAACTTGATTGTTGAC AAAGAGCGCTATCCGCTTACCGGCATGATTGTCGGGTCTATAATAGCGGGTTTTGTGCTGAATTTTATCTTTGTGAATTA TCGGGTGAGTGTGCGGCAGAGTGTTGCAGACAGTATGAAAAACGTAATTAATGCGTTGCTGGGCATTGTAAATGTATTTG CAGATGTCATGAGTTATATTCGGCTTTGGGCGGTGGGATTGGCCGGAGGGGCAATCAGTGCGACAGTTAATGAAATGACA CACCCTCTGTTTGCCAATTTCCTGGCGTTCCTTGGGATAGTGCTACTGCTGTTTGGACACGGGCTGAATTACGTAATGAG CATACTGTCGGTGATTGTGCACGGTGTGCGCTTGAATACCTTGGAGTTTTCTAATCATGTGGGTCTGATGTGGACAGGCA TACGATATACTCCCTTTAGGGAGCGTTAG
Upstream 100 bases:
>100_bases CGGTGTACCTCGGTGATCAGCAGGTTGCTGCAGTAGTGCGGGGGAAGATGTCTAAGAAGAATCTGGTAGACGTGAGTCGG ATGGAACAAGAGGATACACG
Downstream 100 bases:
>100_bases CATAGAAAGAGGTAGAAAAAGAGTGGAGGGCTCGTTATGAATTTTGGTATGTTTGGCGCCGCGGCGGTGCTGGGGATCTC TGCGGTGGGTTCTGCGCTCG
Product: V-type ATP synthase subunit I
Products: ADP; phosphate; H+
Alternate protein names: V-ATPase subunit I 1
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MIVPMKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASEQLAELHALDARCVQAIALVTDAQTKNVTRGEECRVAGQVV EAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFDPADVRALAQRGIHLIPVELSERSYRCLPDELQTLCLARRG GLVRCVLVADKPGLPPSLPADARALELPDVSPADLFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVH LSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQLRNNRWVNLISPLMNFLGTV PGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGGIVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPV QYVPASLARIAVWEISGFADAAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVD KERYPLTGMIVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMT HPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNTLEFSNHVGLMWTGIRYTPFRER
Sequences:
>Translated_622_residues MIVPMKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASEQLAELHALDARCVQAIALVTDAQTKNVTRGEECRVAGQVV EAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFDPADVRALAQRGIHLIPVELSERSYRCLPDELQTLCLARRG GLVRCVLVADKPGLPPSLPADARALELPDVSPADLFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVH LSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQLRNNRWVNLISPLMNFLGTV PGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGGIVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPV QYVPASLARIAVWEISGFADAAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVD KERYPLTGMIVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMT HPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNTLEFSNHVGLMWTGIRYTPFRER >Mature_622_residues MIVPMKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASEQLAELHALDARCVQAIALVTDAQTKNVTRGEECRVAGQVV EAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFDPADVRALAQRGIHLIPVELSERSYRCLPDELQTLCLARRG GLVRCVLVADKPGLPPSLPADARALELPDVSPADLFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVH LSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQLRNNRWVNLISPLMNFLGTV PGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGGIVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPV QYVPASLARIAVWEISGFADAAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVD KERYPLTGMIVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMT HPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNTLEFSNHVGLMWTGIRYTPFRER
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane
COG id: COG1269
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit I
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase 116 kDa subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): VATI1_TREPA (O83444)
Other databases:
- EMBL: AE000520 - PIR: B71326 - RefSeq: NP_218869.1 - ProteinModelPortal: O83444 - GeneID: 2610939 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0429 - NMPDR: fig|243276.1.peg.428 - TIGR: TP_0429 - HOGENOM: HBG732011 - OMA: YNNPSFA - ProtClustDB: PRK05771 - BioCyc: TPAL243276:TP_0429-MONOMER - BRENDA: 3.6.3.14 - InterPro: IPR002490 - PANTHER: PTHR11629
Pfam domain/function: PF01496 V_ATPase_I
EC number: 3.6.3.14
Molecular weight: Translated: 69078; Mature: 69078
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x201c05e8)-; HASH(0x20e8b7ec)-; HASH(0x20d4092c)-; HASH(0x1fd7c130)-; HASH(0x20695a50)-; HASH(0x1f501f40)-; HASH(0x1e1b455c)-; HASH(0x20924600)-;
Cys/Met content:
2.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPMKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASEQLAELHALDARCVQAIALVT CCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQTKNVTRGEECRVAGQVVEAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC PADVRALAQRGIHLIPVELSERSYRCLPDELQTLCLARRGGLVRCVLVADKPGLPPSLPA HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC DARALELPDVSPADLFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVH CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQ HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC LRNNRWVNLISPLMNFLGTVPGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGG CCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPVQYVPASLARIAVWEISGFAD HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH AAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KERYPLTGMIVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLWAVGLAGGAISATVNEMTHPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE LEFSNHVGLMWTGIRYTPFRER EEECCCCCEEEECCCCCCCCCH >Mature Secondary Structure MIVPMKKVTLLVLGSEQERSLQALRSFGAVHVQLRECASEQLAELHALDARCVQAIALVT CCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAQTKNVTRGEECRVAGQVVEAAEAVEQIVRTHSDRVELAQRIAQCIAHLERCEPWGDFD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC PADVRALAQRGIHLIPVELSERSYRCLPDELQTLCLARRGGLVRCVLVADKPGLPPSLPA HHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC DARALELPDVSPADLFVRLRQLREECATLTQRLLAYSEYQGAIRALRQKIAADIEFERVH CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LSMVSVDVSQWRETGETLRIAHVSGYLPVSRVRAFSECARKEAWAYCCVDPMPEDPVPTQ HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCC LRNNRWVNLISPLMNFLGTVPGYWEVDISGFFLLFFGVFFSIIFADAGYGAVLTLVSLGG CCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IVLSKRKHAVVSPAWCLGLYLGTLTMVWGALVCNWFGVPVQYVPASLARIAVWEISGFAD HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH AAQRNKNQMHVCFFLGLLHLCLGHLIVVRRTFRSLRVLAEFGSLLMLGGMYVVVLNLIVD HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KERYPLTGMIVGSIIAGFVLNFIFVNYRVSVRQSVADSMKNVINALLGIVNVFADVMSYI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLWAVGLAGGAISATVNEMTHPLFANFLAFLGIVLLLFGHGLNYVMSILSVIVHGVRLNT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEE LEFSNHVGLMWTGIRYTPFRER EEECCCCCEEEECCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876